RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 STXBP6Q8NFX7 210 aa13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 OR1S1Q8NH92 325 aa13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 WDR12Q9GZL7 423 aaKnown RBP13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 JTBO76095 146 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 NDUFB6O95139 128 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 ZNF688P0C7X2 276 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 RD3LP0DJH9 198 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 IL7P13232 177 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 INPP1P49441 399 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 CCDC32Q9BV29 185 aa13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
TRAPPC3-202ENST00000373162 HELTA6NFD8 242 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 C4BPBP20851 252 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 RPL11P62913 178 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 ZNF90Q03938 601 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 GGNBP1Q5YKI7 109 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 THAP8Q8NA92 274 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 OR51G1Q8NGK1 321 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 LINC00476Q8WZB0 136 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
TRAPPC3-202ENST00000373162 C9orf170A2RU37 121 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 IAPPP10997 89 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 OR8G2PQ6IF36 304 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 CEMP1Q6PRD7 247 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 Q8NAQ8 132 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 CSNK1G2-AS1Q8NCQ2 148 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 NARS2Q96I59 477 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 RARRES2Q99969 163 aa13.09□□□□□ -0.31
TRAPPC3-202ENST00000373162 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 KNCNA6PVL3 124 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 SYNGR2O43760 224 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 IFNA4P05014 189 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 EIF2B2P49770 351 aaKnown RBP13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 PMS2P11Q13670 270 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 OR11H2Q8NH07 326 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 TRGV9Q99603 122 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 NRN1Q9NPD7 142 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 FLVCR2Q9UPI3 526 aa13.08□□□□□ -0.32
TRAPPC3-202ENST00000373162 CXorf65A6NEN9 183 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 ZNF705EA8MWA4 302 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 SOCS3O14543 225 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 ADAP1O75689 374 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 HOXB5P09067 269 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 SPP1P10451 314 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 ID3Q02535 119 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 DHRS2Q13268 280 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 SIGLEC15Q6ZMC9 328 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 STHQ8IWL8 128 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 SLC35E1Q96K37 410 aa13.07□□□□□ -0.32
TRAPPC3-202ENST00000373162 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 TMEM217Q8N7C4 229 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 OR4D5Q8NGN0 318 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 C17orf77Q96MU5 243 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 CIB3Q96Q77 187 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 RAB40CQ96S21 281 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 X6R8D5 127 aa13.06□□□□□ -0.32
TRAPPC3-202ENST00000373162 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
TRAPPC3-202ENST00000373162 PMS2P5A8MQ11 134 aa13.05□□□□□ -0.32
TRAPPC3-202ENST00000373162 MED6O75586 246 aa13.05□□□□□ -0.32
TRAPPC3-202ENST00000373162 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
TRAPPC3-202ENST00000373162 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
TRAPPC3-202ENST00000373162 C7orf50Q9BRJ6 194 aaKnown RBP13.05□□□□□ -0.32
TRAPPC3-202ENST00000373162 CENPXA8MT69 81 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 PLA2G10O15496 165 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 UPK1BO75841 260 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 OR4E1P0C645 316 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 RBMY1A1P0DJD3 496 aaKnown RBP13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 RBMY1CP0DJD4 496 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 NUP62P37198 522 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 RAB11AP62491 216 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 RBMY1FQ15415 496 aaKnown RBP13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 C1orf194Q5T5A4 169 aa13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC3-202ENST00000373162 H3BMM0 161 aa13.03□□□□□ -0.32
TRAPPC3-202ENST00000373162 WRBO00258 174 aa13.03□□□□□ -0.32
TRAPPC3-202ENST00000373162 PAX9P55771 341 aa13.03□□□□□ -0.32
TRAPPC3-202ENST00000373162 TMEM182Q6ZP80 229 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-202ENST00000373162 FRAS1Q86XX4 4008 aa13.03□□□□□ -0.32
TRAPPC3-202ENST00000373162 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 ANXA7P20073 488 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 NANOS2P60321 138 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 POLR2GP62487 172 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 PBDC1Q9BVG4 233 aa13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
TRAPPC3-202ENST00000373162 IGHV4-28A0A0C4DH34 117 aa13.01□□□□□ -0.33
TRAPPC3-202ENST00000373162 SNRPGP15A8MWD9 76 aa13.01□□□□□ -0.33
TRAPPC3-202ENST00000373162 H3BP45 60 aa13.01□□□□□ -0.33
TRAPPC3-202ENST00000373162 DEFB4AO15263 64 aa13.01□□□□□ -0.33
TRAPPC3-202ENST00000373162 LYRM1O43325 122 aa13.01□□□□□ -0.33
TRAPPC3-202ENST00000373162 LYZP61626 148 aa13.01□□□□□ -0.33
TRAPPC3-202ENST00000373162 OR2F1Q13607 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms