RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 SIGLEC15Q6ZMC9 328 aa7.16□□□□□ -1.26
CNIH4-202ENST00000366857 COMMD5Q9GZQ3 224 aa7.16□□□□□ -1.26
CNIH4-202ENST00000366857 PPT1P50897 306 aa7.16□□□□□ -1.26
CNIH4-202ENST00000366857 SCGB1C1Q8TD33 95 aa7.16□□□□□ -1.26
CNIH4-202ENST00000366857 PBDC1Q9BVG4 233 aa7.16□□□□□ -1.26
CNIH4-202ENST00000366857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.15□□□□□ -1.26
CNIH4-202ENST00000366857 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 SELENOTP62341 195 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 FOXL1Q12952 345 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 LINC01356Q8N9X3 169 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 OR1L6Q8NGR2 347 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 CHRDL1Q9BU40 450 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 DNAJC4Q9NNZ3 241 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.26
CNIH4-202ENST00000366857 B4DSR2 109 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 APOC3P02656 99 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 ERHP84090 104 aaKnown RBP7.15□□□□□ -1.26
CNIH4-202ENST00000366857 FXYD3Q14802 87 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 CLEC12BQ2HXU8 276 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 LCN15Q6UWW0 184 aa7.15□□□□□ -1.26
CNIH4-202ENST00000366857 SCO2A0A1W2PP80 73 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 CYB5BO43169 146 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 PAGE4O60829 102 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 ZNF253O75346 499 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.27
CNIH4-202ENST00000366857 FAM231DQ6ZW35 169 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 ZNF702PQ9H963 129 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 DNAH7Q8WXX0 4024 aa7.15□□□□□ -1.27
CNIH4-202ENST00000366857 LINC00310P59036 64 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 TNXAQ16473 311 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 APRG1Q8IVJ8 170 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 TVP23CQ96ET8 276 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 TMEM160Q9NX00 188 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 GNG13Q9P2W3 67 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 RHOBP62745 196 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 FAM122CQ6P4D5 195 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 SLC25A39Q9BZJ4 359 aaPredicted RBP7.14□□□□□ -1.27
CNIH4-202ENST00000366857 ACACBO00763 2458 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 TRAV8-2A0A0B4J237 113 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 TMEM89A2RUT3 159 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 F6UZH7 168 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 C8orf88P0DMB2 117 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 FOXA3P55318 350 aaPredicted RBP7.14□□□□□ -1.27
CNIH4-202ENST00000366857 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
CNIH4-202ENST00000366857 PQLC2Q6ZP29 291 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 RNF2Q99496 336 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 FOXC2Q99958 501 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 CSMD3Q7Z407 3707 aa7.14□□□□□ -1.27
CNIH4-202ENST00000366857 CRYBB3P26998 211 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 ETFRF1Q6IPR1 90 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 NIPSNAP3BQ9BS92 247 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 NAT8Q9UHE5 227 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 COL8A1P27658 744 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 TMEM88Q6PEY1 159 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 NARS2Q96I59 477 aaKnown RBP7.13□□□□□ -1.27
CNIH4-202ENST00000366857 MOB4Q9Y3A3 225 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 TRBV19A0A075B6N1 114 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 PRH1P02810 166 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 CRIP1P50238 77 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 ZNF355PQ9NSJ1 428 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 NF1P21359 2839 aa7.13□□□□□ -1.27
CNIH4-202ENST00000366857 ZNF727A8MUV8 499 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 C11orf94C9JXX5 98 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 SLC17A3O00476 420 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 UBE2CO00762 179 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 TMEM183BQ1AE95 376 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 TIGITQ495A1 244 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 OCC1Q8TAD7 63 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 FAM103A1Q9BTL3 118 aaKnown RBP7.12□□□□□ -1.27
CNIH4-202ENST00000366857 CTDSP1Q9GZU7 261 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 CDC42EP3Q9UKI2 254 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 TP53TG3Q9ULZ0 132 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 EPG5Q9HCE0 2579 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 CRYBA1P05813 215 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 FAM106CPP0CH98 169 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 MMDQ15546 238 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 UHRF2Q96PU4 802 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 A8MTW9 85 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 HMGB3O15347 200 aaKnown RBP7.12□□□□□ -1.27
CNIH4-202ENST00000366857 PYYP10082 97 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 LINC00305Q7Z4B0 112 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 TNFRSF19Q9NS68 423 aa7.12□□□□□ -1.27
CNIH4-202ENST00000366857 MDFIC2A0A1B0GVS7 189 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 BUB3O43684 328 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 ATP5J2P56134 94 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 RNASE11Q8TAA1 199 aaKnown RBP7.11□□□□□ -1.27
CNIH4-202ENST00000366857 TREM1Q9NP99 234 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 A0A1B0GXF2 115 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 LYPD1Q8N2G4 141 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 SERTAD4Q9NUC0 356 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 MT-ND4LP03901 98 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 SUB1P53999 127 aaKnown RBP eCLIP7.11□□□□□ -1.27
CNIH4-202ENST00000366857 TCTEX1D4Q5JR98 221 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 ACTL10Q5JWF8 245 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 TEX38Q6PEX7 206 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 PFDN5Q99471 154 aa7.11□□□□□ -1.27
CNIH4-202ENST00000366857 TRAV40A0A0B4J280 105 aa7.1□□□□□ -1.27
CNIH4-202ENST00000366857 G3V318 75 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms