RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 KLRD1Q13241 179 aa18.04■□□□□ 0.48
LDB1-201ENST00000361198 ITLN2Q8WWU7 325 aaPredicted RBP18.04■□□□□ 0.48
LDB1-201ENST00000361198 DNAJC4Q9NNZ3 241 aa18.04■□□□□ 0.48
LDB1-201ENST00000361198 TRAV5A0A0B4J249 113 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 MT-ND6P03923 174 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 COX19Q49B96 90 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 Q6ZWC4 215 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 SLC25A2Q9BXI2 301 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 RNASE7Q9H1E1 156 aaKnown RBP18.03■□□□□ 0.48
LDB1-201ENST00000361198 HILPDAQ9Y5L2 63 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 SVEP1Q4LDE5 3571 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 TEX22C9J3V5 150 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 IGFBPL1Q8WX77 278 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 DPM3Q9P2X0 92 aa18.03■□□□□ 0.48
LDB1-201ENST00000361198 CRYGCP07315 174 aa18.02■□□□□ 0.48
LDB1-201ENST00000361198 WDR73Q6P4I2 378 aa18.02■□□□□ 0.48
LDB1-201ENST00000361198 M0R1W7 72 aa18.02■□□□□ 0.47
LDB1-201ENST00000361198 GNLYP22749 145 aa18.02■□□□□ 0.47
LDB1-201ENST00000361198 PATE2Q6UY27 113 aa18.02■□□□□ 0.47
LDB1-201ENST00000361198 LHFPL4Q7Z7J7 247 aa18.02■□□□□ 0.47
LDB1-201ENST00000361198 RNF5Q99942 180 aa18.02■□□□□ 0.47
LDB1-201ENST00000361198 CDC42EP3Q9UKI2 254 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 IGHV3-21A0A0B4J1V1 117 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 SMIM27A0A1W2PRY6 76 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 COX7A2P2O60397 106 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 RNF224P0DH78 156 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 PRTN3P24158 256 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 ETFRF1Q6IPR1 90 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 SRSF12Q8WXF0 261 aaKnown RBP18.01■□□□□ 0.47
LDB1-201ENST00000361198 UBTD1Q9HAC8 227 aa18.01■□□□□ 0.47
LDB1-201ENST00000361198 CSMD1Q96PZ7 3565 aa18■□□□□ 0.47
LDB1-201ENST00000361198 MOSP00540 346 aa18■□□□□ 0.47
LDB1-201ENST00000361198 GPR6P46095 362 aaPredicted RBP18■□□□□ 0.47
LDB1-201ENST00000361198 PLGLAQ15195 96 aa18■□□□□ 0.47
LDB1-201ENST00000361198 TMEM136Q6ZRR5 245 aa18■□□□□ 0.47
LDB1-201ENST00000361198 BAGE3Q86Y29 109 aa18■□□□□ 0.47
LDB1-201ENST00000361198 BAGE2Q86Y30 109 aa18■□□□□ 0.47
LDB1-201ENST00000361198 TBX15Q96SF7 602 aa18■□□□□ 0.47
LDB1-201ENST00000361198 A0A1W2PRD5 423 aa18■□□□□ 0.47
LDB1-201ENST00000361198 A0A1W2PRF3 423 aa18■□□□□ 0.47
LDB1-201ENST00000361198 A0A1W2PRM7 423 aa18■□□□□ 0.47
LDB1-201ENST00000361198 C19orf84I3L1E1 186 aa18■□□□□ 0.47
LDB1-201ENST00000361198 UBE2L3P68036 154 aaKnown RBP18■□□□□ 0.47
LDB1-201ENST00000361198 IBA57Q5T440 356 aaKnown RBP18■□□□□ 0.47
LDB1-201ENST00000361198 C10orf113Q5VZT2 155 aa18■□□□□ 0.47
LDB1-201ENST00000361198 OR5AU1Q8NGC0 362 aa18■□□□□ 0.47
LDB1-201ENST00000361198 CFHR4Q92496 578 aa18■□□□□ 0.47
LDB1-201ENST00000361198 ZNF355PQ9NSJ1 428 aa18■□□□□ 0.47
LDB1-201ENST00000361198 F11RQ9Y624 299 aaKnown RBP18■□□□□ 0.47
LDB1-201ENST00000361198 ODF3BA8MYP8 253 aa17.99■□□□□ 0.47
LDB1-201ENST00000361198 FXYD3Q14802 87 aa17.99■□□□□ 0.47
LDB1-201ENST00000361198 MMDQ15546 238 aa17.99■□□□□ 0.47
LDB1-201ENST00000361198 USF2Q15853 346 aaPredicted RBP17.99■□□□□ 0.47
LDB1-201ENST00000361198 OR1L4Q8NGR5 311 aa17.99■□□□□ 0.47
LDB1-201ENST00000361198 TNFRSF19Q9NS68 423 aa17.99■□□□□ 0.47
LDB1-201ENST00000361198 NAT8BQ9UHF3 227 aa17.99■□□□□ 0.47
LDB1-201ENST00000361198 F2Z2F3 143 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 CD24P25063 80 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 TEX43Q6ZNM6 134 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 SPTAN1Q13813 2472 aaKnown RBP17.98■□□□□ 0.47
LDB1-201ENST00000361198 CD33P20138 364 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 ZFP36P26651 326 aaKnown RBP17.98■□□□□ 0.47
LDB1-201ENST00000361198 TMEM116Q8NCL8 245 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 HSPB9Q9BQS6 159 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 GNB4Q9HAV0 340 aa17.98■□□□□ 0.47
LDB1-201ENST00000361198 A6NNC1 897 aa17.97■□□□□ 0.47
LDB1-201ENST00000361198 ZNF705FA8MVS1 300 aaPredicted RBP17.97■□□□□ 0.47
LDB1-201ENST00000361198 ZNF705DP0CH99 300 aaPredicted RBP17.97■□□□□ 0.47
LDB1-201ENST00000361198 ZNF705BP0CI00 300 aaPredicted RBP17.97■□□□□ 0.47
LDB1-201ENST00000361198 BPIFB3P59826 476 aa17.97■□□□□ 0.47
LDB1-201ENST00000361198 OR10J3Q5JRS4 329 aa17.97■□□□□ 0.47
LDB1-201ENST00000361198 EREGO14944 169 aa17.97■□□□□ 0.47
LDB1-201ENST00000361198 PYYP10082 97 aa17.97■□□□□ 0.47
LDB1-201ENST00000361198 CEACAM3P40198 252 aa17.97■□□□□ 0.47
LDB1-201ENST00000361198 CORTO00230 105 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 FBLN7Q53RD9 439 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 MGST1P10620 155 aaKnown RBP17.96■□□□□ 0.47
LDB1-201ENST00000361198 LINC00305Q7Z4B0 112 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 VMO1Q7Z5L0 202 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 C22orf15Q8WYQ4 148 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 TRGV9Q99603 122 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 PAXXQ9BUH6 204 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 SNHG12Q9BXW3 62 aa17.96■□□□□ 0.47
LDB1-201ENST00000361198 NBR2O15453 112 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 SPINK4O60575 86 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 HLA-DQA1P01909 254 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 AMY1AP04745 511 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 BRS3P32247 399 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 TOMM20LQ6UXN7 152 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 FAM231DQ6ZW35 169 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 C20orf144Q9BQM9 153 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 CNIH1O95406 144 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 GPX1P07203 203 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 ORM2P19652 201 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 PAX2Q02962 417 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 C1orf122Q6ZSJ8 110 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 SAMD10Q9BYL1 202 aa17.95■□□□□ 0.46
LDB1-201ENST00000361198 GSX1Q9H4S2 264 aaPredicted RBP17.95■□□□□ 0.46
LDB1-201ENST00000361198 CFAP46Q8IYW2 2715 aa17.94■□□□□ 0.46
LDB1-201ENST00000361198 IZUMO1RA6ND01 250 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms