RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LINC00854A0A1B0GVQ3 168 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 PTTG1O95997 202 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 IFNA4P05014 189 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 CD5P06127 495 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 RD3LP0DJH9 198 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 DEFA1P59665 94 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 DEFA3P59666 94 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 SRPXP78539 464 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 DHRS2Q13268 280 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 GGNBP1Q5YKI7 109 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 ETFRF1Q6IPR1 90 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 CENPSQ8N2Z9 138 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 RARRES2Q99969 163 aa12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 SLC25A21Q9BQT8 299 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-201ENST00000355572 C9orf170A2RU37 121 aa12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 NANOS2P60321 138 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 OR2F1Q13607 317 aa12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 Q6ZNX1 250 aa12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 TMEM182Q6ZP80 229 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 LINC00476Q8WZB0 136 aa12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 RNF125Q96EQ8 232 aa12.17□□□□□ -0.46
PDLIM7-201ENST00000355572 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 H3BP45 60 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 WRBO00258 174 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 NDUFB6O95139 128 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 OXA1LQ15070 435 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 PSMG4Q5JS54 123 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 ACTL10Q5JWF8 245 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 CEMP1Q6PRD7 247 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 Q8NAQ8 132 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 GATAD1Q8WUU5 269 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
PDLIM7-201ENST00000355572 CCNKO75909 580 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 JTBO76095 146 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 RBMY1A1P0DJD3 496 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 RBMY1CP0DJD4 496 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 SLC25A6P12236 298 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 IFITM3Q01628 133 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 RBMY1FQ15415 496 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 GDF5OSQ5U4N7 250 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 STHQ8IWL8 128 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 CSNK1G2-AS1Q8NCQ2 148 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 RAB40CQ96S21 281 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 X6R8D5 127 aa12.15□□□□□ -0.46
PDLIM7-201ENST00000355572 ZFP92A6NM28 416 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 SYNGR2O43760 224 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 SCGB2A1O75556 95 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 ATF4P18848 351 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 GATA2P23769 480 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 UBE2MP61081 183 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 SIGLEC15Q6ZMC9 328 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 NOXA1Q86UR1 476 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 SLC35E1Q96K37 410 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 PAIP2BQ9ULR5 123 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 BIRC6Q9NR09 4857 aa12.14□□□□□ -0.47
PDLIM7-201ENST00000355572 KMT2AQ03164 3969 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 HELTA6NFD8 242 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 SOCS3O14543 225 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 PLA2G10O15496 165 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 IL7P13232 177 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 LYZP61626 148 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 POLR2GP62487 172 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 NARS2Q96I59 477 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 C11orf68Q9H3H3 251 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
PDLIM7-201ENST00000355572 NUPR2A6NF83 97 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 OR4E1P0C645 316 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 PAX9P55771 341 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 ID3Q02535 119 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 ASAH1Q13510 395 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 TRIQKQ629K1 86 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 OR4D5Q8NGN0 318 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 TRGV9Q99603 122 aa12.12□□□□□ -0.47
PDLIM7-201ENST00000355572 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-201ENST00000355572 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
PDLIM7-201ENST00000355572 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
PDLIM7-201ENST00000355572 PPP1R14BQ96C90 147 aa12.11□□□□□ -0.47
PDLIM7-201ENST00000355572 A0A1B0GVG6 124 aa12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 ZNF705EA8MWA4 302 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 H3BMM0 161 aa12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 LY6G6CO95867 125 aa12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 ATP5IP56385 69 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 RAB11AP62491 216 aa12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms