RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 PMS2P5A8MQ11 134 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 SRD5A1P18405 259 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 DMRTA1Q5VZB9 504 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 ROS1P08922 2347 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 CD7P09564 240 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 LINC00614P0C842 121 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 PSG1P11464 419 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
PTPN11-201ENST00000351677 TTC9CQ8N5M4 171 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 WFDC12Q8WWY7 111 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 EVI2AP22794 236 aa13.15□□□□□ -0.31
PTPN11-201ENST00000351677 LINC01587Q99440 93 aa13.15□□□□□ -0.31
PTPN11-201ENST00000351677 HEATR1Q9H583 2144 aaKnown RBP13.15□□□□□ -0.31
PTPN11-201ENST00000351677 TMEM242Q9NWH2 141 aa13.15□□□□□ -0.31
PTPN11-201ENST00000351677 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.31
PTPN11-201ENST00000351677 TRBV24-1A0A075B6N3 115 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 A0A1B0GW64 132 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 NUTF2P61970 127 aaKnown RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 LINC01551Q86U37 167 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 HIST3H2BBQ8N257 126 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 MYO7BQ6PIF6 2116 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 VMO1Q7Z5L0 202 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 MRAP2Q96G30 205 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 SLC25A48Q6ZT89 311 aaKnown RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 NPIPB5A8MRT5 1133 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 H0YJW9 148 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 RPL15P61313 204 aaKnown RBP13.14□□□□□ -0.31
PTPN11-201ENST00000351677 NIT1Q86X76 327 aa13.14□□□□□ -0.31
PTPN11-201ENST00000351677 PAX1P15863 534 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 KLF17Q5JT82 389 aaPredicted RBP13.13□□□□□ -0.31
PTPN11-201ENST00000351677 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 OR4X2Q8NGF9 303 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 ASCL4Q6XD76 172 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
PTPN11-201ENST00000351677 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 LYL1P12980 280 aa13.13□□□□□ -0.31
PTPN11-201ENST00000351677 ZNF474Q6S9Z5 364 aaPredicted RBP13.13□□□□□ -0.31
PTPN11-201ENST00000351677 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-201ENST00000351677 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-201ENST00000351677 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-201ENST00000351677 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-201ENST00000351677 LAMTOR2Q9Y2Q5 125 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 WNT2P09544 360 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 SLC25A39Q9BZJ4 359 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-201ENST00000351677 ACACAQ13085 2346 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 AMBPP02760 352 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 ZNF418Q8TF45 676 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-201ENST00000351677 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 LYPD2Q6UXB3 125 aa13.12□□□□□ -0.31
PTPN11-201ENST00000351677 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 CD33P20138 364 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 TPTE2P1Q5T6R2 138 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 Q6ZS49 121 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 IGKV1-6A0A0C4DH72 117 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 E9PQ18 207 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 EMP1P54849 157 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 JKAMPQ9P055 326 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 IGHG3P01860 377 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 PAX8Q06710 450 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 MLANAQ16655 118 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 FANCMQ8IYD8 2048 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 TMEM167AQ8TBQ9 72 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 NEUROG1Q92886 237 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 LY6HO94772 140 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 OR13C6PQ8NH95 151 aa13.11□□□□□ -0.31
PTPN11-201ENST00000351677 APOMO95445 188 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 NUP37Q8NFH4 326 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 ZNRD1Q9P1U0 126 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 RIF1Q5UIP0 2472 aaKnown RBP13.1□□□□□ -0.31
PTPN11-201ENST00000351677 VDAC2P45880 294 aaPredicted RBP13.1□□□□□ -0.31
PTPN11-201ENST00000351677 HBDP02042 147 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 ZNF585BQ52M93 769 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 HEATR5AQ86XA9 2040 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 TMEM101Q96IK0 257 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 LY6G6EA0A0G2JKS1 128 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 OR5AN1Q8NGI8 311 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 COPS9Q8WXC6 57 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 U3KQA8 63 aa13.1□□□□□ -0.31
PTPN11-201ENST00000351677 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 CFPP27918 469 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 TRAV9-2A0A087WT02 112 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 IGKV1-16P04430 117 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 FOXL1Q12952 345 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 C2orf88Q9BSF0 95 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 TRAV41A0A0B4J266 112 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms