RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 OR8G2PQ6IF36 304 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 LRTM2Q8N967 370 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 GLMPQ8WWB7 406 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 C1QTNF4Q9BXJ3 329 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 FBXL17Q9UF56 701 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 RYR2Q92736 4967 aa13.02□□□□□ -0.32
CKLF-202ENST00000345436 CFDP00746 253 aaPredicted RBP13.02□□□□□ -0.33
CKLF-202ENST00000345436 PSG1P11464 419 aa13.02□□□□□ -0.33
CKLF-202ENST00000345436 PSMG4Q5JS54 123 aa13.02□□□□□ -0.33
CKLF-202ENST00000345436 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
CKLF-202ENST00000345436 TRPT1Q86TN4 253 aaKnown RBP13.02□□□□□ -0.33
CKLF-202ENST00000345436 TMEM170AQ8WVE7 144 aa13.02□□□□□ -0.33
CKLF-202ENST00000345436 TRIM63Q969Q1 353 aa13.02□□□□□ -0.33
CKLF-202ENST00000345436 RNF125Q96EQ8 232 aa13.02□□□□□ -0.33
CKLF-202ENST00000345436 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
CKLF-202ENST00000345436 ZNF701M0R085 212 aaPredicted RBP13.01□□□□□ -0.33
CKLF-202ENST00000345436 BUB3O43684 328 aa13.01□□□□□ -0.33
CKLF-202ENST00000345436 MIFP14174 115 aa13.01□□□□□ -0.33
CKLF-202ENST00000345436 ID1P41134 155 aa13.01□□□□□ -0.33
CKLF-202ENST00000345436 UBE2MP61081 183 aaKnown RBP13.01□□□□□ -0.33
CKLF-202ENST00000345436 EWSR1Q01844 656 aaKnown RBP eCLIP13.01□□□□□ -0.33
CKLF-202ENST00000345436 USF2Q15853 346 aaPredicted RBP13.01□□□□□ -0.33
CKLF-202ENST00000345436 C1orf194Q5T5A4 169 aa13.01□□□□□ -0.33
CKLF-202ENST00000345436 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
CKLF-202ENST00000345436 PBDC1Q9BVG4 233 aa13.01□□□□□ -0.33
CKLF-202ENST00000345436 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
CKLF-202ENST00000345436 SFT2D2O95562 160 aa13□□□□□ -0.33
CKLF-202ENST00000345436 TCTAP57738 103 aa13□□□□□ -0.33
CKLF-202ENST00000345436 GAMTQ14353 236 aa13□□□□□ -0.33
CKLF-202ENST00000345436 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
CKLF-202ENST00000345436 PPP1R14BQ96C90 147 aa13□□□□□ -0.33
CKLF-202ENST00000345436 V9GYH0 126 aa13□□□□□ -0.33
CKLF-202ENST00000345436 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 KNCNA6PVL3 124 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 CENPXA8MT69 81 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 C11orf94C9JXX5 98 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 PITX3O75364 302 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 GGNBP1Q5YKI7 109 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 TRIQKQ629K1 86 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 LYSTQ99698 3801 aa12.99□□□□□ -0.33
CKLF-202ENST00000345436 SYNGR2O43760 224 aa12.98□□□□□ -0.33
CKLF-202ENST00000345436 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
CKLF-202ENST00000345436 TRGV9Q99603 122 aa12.98□□□□□ -0.33
CKLF-202ENST00000345436 HRH4Q9H3N8 390 aa12.98□□□□□ -0.33
CKLF-202ENST00000345436 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
CKLF-202ENST00000345436 IFNA21P01568 189 aa12.97□□□□□ -0.33
CKLF-202ENST00000345436 IAPPP10997 89 aa12.97□□□□□ -0.33
CKLF-202ENST00000345436 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
CKLF-202ENST00000345436 NANOS2P60321 138 aaKnown RBP12.97□□□□□ -0.33
CKLF-202ENST00000345436 LYZP61626 148 aa12.97□□□□□ -0.33
CKLF-202ENST00000345436 PPP1R1AQ13522 171 aa12.97□□□□□ -0.33
CKLF-202ENST00000345436 ZNF79Q15937 498 aa12.97□□□□□ -0.33
CKLF-202ENST00000345436 COQ8AQ8NI60 647 aa12.97□□□□□ -0.33
CKLF-202ENST00000345436 WRBO00258 174 aa12.96□□□□□ -0.33
CKLF-202ENST00000345436 HOXB5P09067 269 aa12.96□□□□□ -0.33
CKLF-202ENST00000345436 CNPY1Q3B7I2 92 aa12.96□□□□□ -0.33
CKLF-202ENST00000345436 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.33
CKLF-202ENST00000345436 LGALS9CQ6DKI2 356 aa12.96□□□□□ -0.33
CKLF-202ENST00000345436 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.33
CKLF-202ENST00000345436 STRAPQ9Y3F4 350 aaKnown RBP12.96□□□□□ -0.33
CKLF-202ENST00000345436 DEFB4AO15263 64 aa12.95□□□□□ -0.34
CKLF-202ENST00000345436 MEOX2P50222 304 aa12.95□□□□□ -0.34
CKLF-202ENST00000345436 ZNF90Q03938 601 aa12.95□□□□□ -0.34
CKLF-202ENST00000345436 S100A7AQ86SG5 101 aa12.95□□□□□ -0.34
CKLF-202ENST00000345436 ZNF705EA8MWA4 302 aaPredicted RBP12.94□□□□□ -0.34
CKLF-202ENST00000345436 H3BMM0 161 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 PSMB3P49720 205 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 OR2F1Q13607 317 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 SPANXN5Q5MJ07 72 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 Q8NAQ8 132 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 BPIFCQ8NFQ6 507 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 MAGT1Q9H0U3 335 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 SLC45A2Q9UMX9 530 aa12.94□□□□□ -0.34
CKLF-202ENST00000345436 IGKV1D-37A0A075B6S9 117 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 NDUFB6O95139 128 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 GIG44P09565 113 aaPredicted RBP12.93□□□□□ -0.34
CKLF-202ENST00000345436 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 GALR1P47211 349 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 C7orf50Q9BRJ6 194 aaKnown RBP12.93□□□□□ -0.34
CKLF-202ENST00000345436 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
CKLF-202ENST00000345436 C9orf170A2RU37 121 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 ISLRO14498 428 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 C4BPBP20851 252 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 GPR82Q96P67 336 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 RBM38Q9H0Z9 239 aaKnown RBP12.92□□□□□ -0.34
CKLF-202ENST00000345436 CLEC5AQ9NY25 188 aa12.92□□□□□ -0.34
CKLF-202ENST00000345436 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
CKLF-202ENST00000345436 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
CKLF-202ENST00000345436 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms