RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KIAA1644Q3SXP7 199 aa16.08■□□□□ 0.17
SPG7-202ENST00000341316 OSTCQ9NRP0 149 aa16.08■□□□□ 0.17
SPG7-202ENST00000341316 ZNF355PQ9NSJ1 428 aa16.08■□□□□ 0.17
SPG7-202ENST00000341316 FBXL7Q9UJT9 491 aa16.08■□□□□ 0.17
SPG7-202ENST00000341316 ASH1LQ9NR48 2969 aaKnown RBP16.08■□□□□ 0.17
SPG7-202ENST00000341316 A0A1W2PRE2 83 aa16.08■□□□□ 0.16
SPG7-202ENST00000341316 COX7A2P2O60397 106 aa16.08■□□□□ 0.16
SPG7-202ENST00000341316 RPL27AP46776 148 aaKnown RBP16.08■□□□□ 0.16
SPG7-202ENST00000341316 TMEM183BQ1AE95 376 aa16.08■□□□□ 0.16
SPG7-202ENST00000341316 PVRIGQ6DKI7 326 aa16.08■□□□□ 0.16
SPG7-202ENST00000341316 TMEM136Q6ZRR5 245 aa16.08■□□□□ 0.16
SPG7-202ENST00000341316 MIEN1Q9BRT3 115 aa16.08■□□□□ 0.16
SPG7-202ENST00000341316 IGHV3-21A0A0B4J1V1 117 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 IGLV2-8P01709 118 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 UBE2L3P68036 154 aaKnown RBP16.07■□□□□ 0.16
SPG7-202ENST00000341316 C10orf113Q5VZT2 155 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 SIGLECL1Q8N7X8 197 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 VAMP8Q9BV40 100 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 MOSP00540 346 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 MT-ND6P03923 174 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 CRYGCP07315 174 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 WDR73Q6P4I2 378 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 C8orf46Q8TAG6 207 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 ONECUT1Q9UBC0 465 aa16.07■□□□□ 0.16
SPG7-202ENST00000341316 LY6LH3BQJ8 138 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 MGST1P10620 155 aaKnown RBP16.06■□□□□ 0.16
SPG7-202ENST00000341316 LHFPL4Q7Z7J7 247 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 IGF2BP2-AS1Q96M15 143 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 FBXL15Q9H469 300 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 RBP4P02753 201 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 GPX1P07203 203 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 BRS3P32247 399 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 RPL19P84098 196 aaKnown RBP16.06■□□□□ 0.16
SPG7-202ENST00000341316 MRPL54Q6P161 138 aaKnown RBP16.06■□□□□ 0.16
SPG7-202ENST00000341316 PPP1R27Q86WC6 154 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 LY6G5BQ8NDX9 201 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 OR8B3Q8NGG8 313 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 OR8B2Q96RD0 313 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 RNF2Q99496 336 aa16.06■□□□□ 0.16
SPG7-202ENST00000341316 ABCA1O95477 2261 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 TEX22C9J3V5 150 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 ISLRO14498 428 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 KRTDAPP60985 99 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 IBA57Q5T440 356 aaKnown RBP16.05■□□□□ 0.16
SPG7-202ENST00000341316 RPEQ96AT9 228 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 LINC00479Q96M42 142 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 RCHY1Q96PM5 261 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 M0QZK8 103 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 OR1L4Q8NGR5 311 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 SERTAD4Q9NUC0 356 aa16.05■□□□□ 0.16
SPG7-202ENST00000341316 TBL2Q9Y4P3 447 aaKnown RBP16.05■□□□□ 0.16
SPG7-202ENST00000341316 ITPR1Q14643 2758 aa16.04■□□□□ 0.16
SPG7-202ENST00000341316 ZNF25P17030 456 aaPredicted RBP16.04■□□□□ 0.16
SPG7-202ENST00000341316 NHLRC2Q8NBF2 726 aa16.04■□□□□ 0.16
SPG7-202ENST00000341316 PAXXQ9BUH6 204 aa16.04■□□□□ 0.16
SPG7-202ENST00000341316 TNFRSF19Q9NS68 423 aa16.04■□□□□ 0.16
SPG7-202ENST00000341316 ZNF586Q9NXT0 402 aa16.04■□□□□ 0.16
SPG7-202ENST00000341316 HIVEP3Q5T1R4 2406 aa16.04■□□□□ 0.16
SPG7-202ENST00000341316 AMY1AP04745 511 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 OR10J3Q5JRS4 329 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 ASPHD1Q5U4P2 390 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 LINC00305Q7Z4B0 112 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 Q8N976 141 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 FXYD5Q96DB9 178 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 GSX1Q9H4S2 264 aaPredicted RBP16.03■□□□□ 0.16
SPG7-202ENST00000341316 SMIM27A0A1W2PRY6 76 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 CA1P00915 261 aaPredicted RBP16.03■□□□□ 0.16
SPG7-202ENST00000341316 RPLP1P05386 114 aaKnown RBP16.03■□□□□ 0.16
SPG7-202ENST00000341316 LIPFP07098 398 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 SRIP30626 198 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 AMTP48728 403 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 ARF6P62330 175 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 C11orf71Q6IPW1 123 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 MRPL52Q86TS9 123 aaKnown RBP16.03■□□□□ 0.16
SPG7-202ENST00000341316 KCNS1Q96KK3 526 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 RAB1BQ9H0U4 201 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 NRN1Q9NPD7 142 aa16.03■□□□□ 0.16
SPG7-202ENST00000341316 A6NNC1 897 aa16.02■□□□□ 0.16
SPG7-202ENST00000341316 BMPR1BO00238 502 aa16.02■□□□□ 0.16
SPG7-202ENST00000341316 ORM2P19652 201 aa16.02■□□□□ 0.16
SPG7-202ENST00000341316 PMCHP20382 165 aa16.02■□□□□ 0.16
SPG7-202ENST00000341316 BPIFB3P59826 476 aa16.02■□□□□ 0.16
SPG7-202ENST00000341316 COX19Q49B96 90 aa16.02■□□□□ 0.16
SPG7-202ENST00000341316 A0A1W2PS18 150 aa16.02■□□□□ 0.15
SPG7-202ENST00000341316 DIRC3C9JPN6 131 aa16.02■□□□□ 0.15
SPG7-202ENST00000341316 TIMM23O14925 209 aa16.02■□□□□ 0.15
SPG7-202ENST00000341316 ZNF253O75346 499 aa16.02■□□□□ 0.15
SPG7-202ENST00000341316 ETFRF1Q6IPR1 90 aa16.02■□□□□ 0.15
SPG7-202ENST00000341316 CDC42EP3Q9UKI2 254 aa16.02■□□□□ 0.15
SPG7-202ENST00000341316 ZNF329Q86UD4 541 aa16.01■□□□□ 0.15
SPG7-202ENST00000341316 TMEM116Q8NCL8 245 aa16.01■□□□□ 0.15
SPG7-202ENST00000341316 OR1B1Q8NGR6 318 aa16.01■□□□□ 0.15
SPG7-202ENST00000341316 AMMECR1Q9Y4X0 333 aaPredicted RBP16.01■□□□□ 0.15
SPG7-202ENST00000341316 F11RQ9Y624 299 aaKnown RBP16.01■□□□□ 0.15
SPG7-202ENST00000341316 HLA-DQA1P01909 254 aa16.01■□□□□ 0.15
SPG7-202ENST00000341316 MED13LQ71F56 2210 aa16.01■□□□□ 0.15
SPG7-202ENST00000341316 SRSF12Q8WXF0 261 aaKnown RBP16.01■□□□□ 0.15
SPG7-202ENST00000341316 FAM168AQ92567 244 aa16.01■□□□□ 0.15
SPG7-202ENST00000341316 TRGV9Q99603 122 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms