RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RARRES2Q99969 163 aa12.41□□□□□ -0.42
BRCC3-202ENST00000340647 FLVCR2Q9UPI3 526 aa12.41□□□□□ -0.42
BRCC3-202ENST00000340647 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
BRCC3-202ENST00000340647 NOXA1Q86UR1 476 aa12.4□□□□□ -0.42
BRCC3-202ENST00000340647 CSNK1G2-AS1Q8NCQ2 148 aa12.4□□□□□ -0.42
BRCC3-202ENST00000340647 LINC00476Q8WZB0 136 aa12.4□□□□□ -0.42
BRCC3-202ENST00000340647 MAGT1Q9H0U3 335 aa12.4□□□□□ -0.42
BRCC3-202ENST00000340647 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 DEFB4AO15263 64 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 IFNA4P05014 189 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 HOXB5P09067 269 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 ATP5IP56385 69 aaPredicted RBP12.39□□□□□ -0.43
BRCC3-202ENST00000340647 DHRS2Q13268 280 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 GGNBP1Q5YKI7 109 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 CENPSQ8N2Z9 138 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 Q8NAQ8 132 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 RNF125Q96EQ8 232 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 C17orf77Q96MU5 243 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 TMED3Q9Y3Q3 217 aa12.39□□□□□ -0.43
BRCC3-202ENST00000340647 C9orf170A2RU37 121 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 FAM90A26D6RGX4 464 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 SCGB2A1O75556 95 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 ADAP1O75689 374 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 JTBO76095 146 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 NDUFB6O95139 128 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 DEFB1P60022 68 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 SPANXN2Q5MJ10 180 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 TMEM182Q6ZP80 229 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-202ENST00000340647 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
BRCC3-202ENST00000340647 C11orf68Q9H3H3 251 aaKnown RBP12.38□□□□□ -0.43
BRCC3-202ENST00000340647 HELTA6NFD8 242 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
BRCC3-202ENST00000340647 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 NANOS2P60321 138 aaKnown RBP12.37□□□□□ -0.43
BRCC3-202ENST00000340647 ID3Q02535 119 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
BRCC3-202ENST00000340647 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 STHQ8IWL8 128 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 WDR12Q9GZL7 423 aaKnown RBP12.37□□□□□ -0.43
BRCC3-202ENST00000340647 X6R8D5 127 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 DNAH10Q8IVF4 4471 aa12.37□□□□□ -0.43
BRCC3-202ENST00000340647 DNAH6Q9C0G6 4158 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 PMS2P5A8MQ11 134 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 ZNF705EA8MWA4 302 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-202ENST00000340647 SOCS3O14543 225 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 SYNGR2O43760 224 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 EIF2B2P49770 351 aaKnown RBP12.36□□□□□ -0.43
BRCC3-202ENST00000340647 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 GDF5OSQ5U4N7 250 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 SIGLEC15Q6ZMC9 328 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-202ENST00000340647 NARS2Q96I59 477 aaKnown RBP12.36□□□□□ -0.43
BRCC3-202ENST00000340647 TRGV9Q99603 122 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
BRCC3-202ENST00000340647 LINC00854A0A1B0GVQ3 168 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 ZFP92A6NM28 416 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 WRBO00258 174 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 PLA2G10O15496 165 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 AP2S1P53680 142 aaPredicted RBP12.35□□□□□ -0.43
BRCC3-202ENST00000340647 PAX9P55771 341 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 UBE2MP61081 183 aaKnown RBP12.35□□□□□ -0.43
BRCC3-202ENST00000340647 OR2F1Q13607 317 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
BRCC3-202ENST00000340647 HERC2O95714 4834 aa12.34□□□□□ -0.43
BRCC3-202ENST00000340647 H3BMM0 161 aa12.34□□□□□ -0.43
BRCC3-202ENST00000340647 OR4E1P0C645 316 aa12.34□□□□□ -0.43
BRCC3-202ENST00000340647 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
BRCC3-202ENST00000340647 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
BRCC3-202ENST00000340647 OR8G2PQ6IF36 304 aa12.34□□□□□ -0.43
BRCC3-202ENST00000340647 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
BRCC3-202ENST00000340647 PBDC1Q9BVG4 233 aa12.34□□□□□ -0.43
BRCC3-202ENST00000340647 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
BRCC3-202ENST00000340647 ELOA3CA0A087WX78 387 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-202ENST00000340647 NAP1L6A6NFF2 107 aa12.33□□□□□ -0.44
BRCC3-202ENST00000340647 H3BP45 60 aa12.33□□□□□ -0.44
BRCC3-202ENST00000340647 CCNKO75909 580 aa12.33□□□□□ -0.44
BRCC3-202ENST00000340647 SPP1P10451 314 aa12.33□□□□□ -0.44
BRCC3-202ENST00000340647 IL7P13232 177 aa12.33□□□□□ -0.44
BRCC3-202ENST00000340647 GATA2P23769 480 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-202ENST00000340647 MORN3Q6PF18 240 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-202ENST00000340647 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 IGHV4-28A0A0C4DH34 117 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 MED6O75586 246 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 LYZP61626 148 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 RAB11AP62491 216 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 TRIQKQ629K1 86 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 C11orf45Q8TAV5 145 aa12.32□□□□□ -0.44
BRCC3-202ENST00000340647 SNRPGP15A8MWD9 76 aa12.31□□□□□ -0.44
BRCC3-202ENST00000340647 LY6G6CO95867 125 aa12.31□□□□□ -0.44
BRCC3-202ENST00000340647 CIB3Q96Q77 187 aaPredicted RBP12.31□□□□□ -0.44
BRCC3-202ENST00000340647 PAIP2BQ9ULR5 123 aaKnown RBP12.31□□□□□ -0.44
BRCC3-202ENST00000340647 HLA-DRB4P13762 266 aa12.3□□□□□ -0.44
BRCC3-202ENST00000340647 NKX2-1P43699 371 aaPredicted RBP12.3□□□□□ -0.44
BRCC3-202ENST00000340647 C1orf194Q5T5A4 169 aa12.3□□□□□ -0.44
BRCC3-202ENST00000340647 ACOT7LQ6ZUV0 252 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms