RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CSMD1Q96PZ7 3565 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 TRAV40A0A0B4J280 105 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 B4DSR2 109 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 GATA2P23769 480 aaPredicted RBP16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 JOSD1Q15040 202 aaPredicted RBP16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 NPIPB3Q92617 1050 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 POLQO75417 2590 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 TRBV20OR9-2A0A075B6H5 130 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 A0A096LNT2 108 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 FAM78BQ5VT40 261 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 ZNF562Q6V9R5 426 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 BRD3OSQ6XYD6 125 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 SRSF8Q9BRL6 282 aaKnown RBP16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 C7orf69Q9H7B7 122 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 PKIAP61925 76 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 CX3CL1P78423 397 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 FOXL1Q12952 345 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 TMEM37Q8WXS4 190 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 SLC25A33Q9BSK2 321 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 HIF1ANQ9NWT6 349 aa16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 AURKAIP1Q9NWT8 199 aaPredicted RBP16.06■□□□□ 0.16
RIPPLY3-201ENST00000329553 CRYGCP07315 174 aa16.05■□□□□ 0.16
RIPPLY3-201ENST00000329553 Q8N9W7 124 aa16.05■□□□□ 0.16
RIPPLY3-201ENST00000329553 SFRP2Q96HF1 295 aa16.05■□□□□ 0.16
RIPPLY3-201ENST00000329553 BTF3L4Q96K17 158 aa16.05■□□□□ 0.16
RIPPLY3-201ENST00000329553 WNT10AQ9GZT5 417 aa16.05■□□□□ 0.16
RIPPLY3-201ENST00000329553 CELSR1Q9NYQ6 3014 aa16.05■□□□□ 0.16
RIPPLY3-201ENST00000329553 IGHV4-38-2P0DP08 117 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 RPL15P61313 204 aaKnown RBP16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 SCO2A0A1W2PP80 73 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 PGPEP1LA6NFU8 196 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 GZMBP10144 247 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 DEFA6Q01524 100 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 DEFB113Q30KQ7 82 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 ETFRF1Q6IPR1 90 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 SEPSECSQ9HD40 501 aaKnown RBP16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 YTHDF2Q9Y5A9 579 aaKnown RBP16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 DOPEY2Q9Y3R5 2298 aa16.04■□□□□ 0.16
RIPPLY3-201ENST00000329553 IGKV1D-37A0A075B6S9 117 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 IGHV3-21A0A0B4J1V1 117 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 GCHFRP30047 84 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 NDPQ00604 133 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 BEX4Q9NWD9 120 aaPredicted RBP16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 C1RLQ9NZP8 487 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 TENM4Q6N022 2769 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 ABCA1O95477 2261 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 CORTO00230 105 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 RHOBP62745 196 aa16.03■□□□□ 0.16
RIPPLY3-201ENST00000329553 MT-CO2P00403 227 aa16.02■□□□□ 0.16
RIPPLY3-201ENST00000329553 AVPP01185 164 aa16.02■□□□□ 0.16
RIPPLY3-201ENST00000329553 SPATA31B1PQ5VZV4 182 aa16.02■□□□□ 0.16
RIPPLY3-201ENST00000329553 THAP8Q8NA92 274 aa16.02■□□□□ 0.16
RIPPLY3-201ENST00000329553 MAPK1IP1LQ8NDC0 245 aa16.02■□□□□ 0.16
RIPPLY3-201ENST00000329553 ARPC1AQ92747 370 aa16.02■□□□□ 0.16
RIPPLY3-201ENST00000329553 A0A0U1RQK1 487 aa16.02■□□□□ 0.15
RIPPLY3-201ENST00000329553 ASPHD1Q5U4P2 390 aa16.02■□□□□ 0.15
RIPPLY3-201ENST00000329553 HIST2H2BCQ6DN03 193 aa16.02■□□□□ 0.15
RIPPLY3-201ENST00000329553 SOX21Q9Y651 276 aaPredicted RBP16.02■□□□□ 0.15
RIPPLY3-201ENST00000329553 MDFIC2A0A1B0GVS7 189 aa16.01■□□□□ 0.15
RIPPLY3-201ENST00000329553 ZNF320A2RRD8 509 aa16.01■□□□□ 0.15
RIPPLY3-201ENST00000329553 CNN1P51911 297 aaKnown RBP16.01■□□□□ 0.15
RIPPLY3-201ENST00000329553 ZNF90Q03938 601 aa16.01■□□□□ 0.15
RIPPLY3-201ENST00000329553 OCC1Q8TAD7 63 aa16.01■□□□□ 0.15
RIPPLY3-201ENST00000329553 IGHV7-81A0A0B4J1V7 117 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 TSTD3H0UI37 97 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 LINC01356Q8N9X3 169 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 TMEM116Q8NCL8 245 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 SGMS2Q8NHU3 365 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 C11orf52Q96A22 123 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 C14orf144Q96I85 54 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 PSMG3-AS1Q96PY0 264 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 TCRBV4S1A1TA0A5B7 111 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 I3L2K1 104 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 TEX38Q6PEX7 206 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 MEGF9Q9H1U4 602 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 TRAPPC1Q9Y5R8 145 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16■□□□□ 0.15
RIPPLY3-201ENST00000329553 ABCA12Q86UK0 2595 aa16■□□□□ 0.15
RIPPLY3-201ENST00000329553 RNF223E7ERA6 249 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 GCGP01275 180 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 EGR2P11161 476 aaPredicted RBP15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 DDTP30046 118 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 KLF17Q5JT82 389 aaPredicted RBP15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 LRRC75A-AS1Q8N1F1 130 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 PIFOQ8TCI5 191 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 RASL11BQ9BPW5 248 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 GATA3P23771 443 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 MIR17HGQ75NE6 70 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 LINC00469Q8N7U9 141 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 ZFHX3Q15911 3703 aa15.99■□□□□ 0.15
RIPPLY3-201ENST00000329553 HLA-DRB1P01911 266 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 TMEM18Q96B42 140 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 HSPB9Q9BQS6 159 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 PRO1933Q9H354 126 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 TNFRSF19Q9NS68 423 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 C9JCJ5 164 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 LOXL1Q08397 574 aaPredicted RBP15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 GBGT1Q8N5D6 347 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 OR10G8Q8NGN5 311 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 GSX1Q9H4S2 264 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms