RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 J3QLI3 93 aa10.96□□□□□ -0.65
TRAK1-201ENST00000327628 LGALS1P09382 135 aaKnown RBP10.96□□□□□ -0.65
TRAK1-201ENST00000327628 TEX43Q6ZNM6 134 aa10.96□□□□□ -0.65
TRAK1-201ENST00000327628 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 H0YJW9 148 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 ZNHIT1O43257 154 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 TCRAP04437 139 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 ASCL4Q6XD76 172 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 UBE2DNLQ8IWF7 75 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 TNFSF13O75888 250 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 FAM90A2PQ658T7 463 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 ERG28Q9UKR5 140 aa10.96□□□□□ -0.66
TRAK1-201ENST00000327628 A0A087WX48 190 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 GNG5P63218 68 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 RAMP3O60896 148 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 HTN3P15516 51 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 MCRIP2Q9BUT9 160 aaKnown RBP10.95□□□□□ -0.66
TRAK1-201ENST00000327628 F8WEM9 126 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 UBE2CO00762 179 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 Q8TCH9 128 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
TRAK1-201ENST00000327628 CDK2AP2O75956 126 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
TRAK1-201ENST00000327628 PSG3Q16557 428 aa10.95□□□□□ -0.66
TRAK1-201ENST00000327628 IL17RELQ6ZVW7 336 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 OCC1Q8TAD7 63 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 GAFA1Q96PS6 74 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 GAS1P54826 345 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 MUC21Q5SSG8 566 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 SAP30O75446 220 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 PRTN3P24158 256 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 FOXF2Q12947 444 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 SRSF6Q13247 344 aaKnown RBP10.94□□□□□ -0.66
TRAK1-201ENST00000327628 A0A0A6YYD4 124 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 LYL1P12980 280 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 NEGR1Q7Z3B1 354 aa10.94□□□□□ -0.66
TRAK1-201ENST00000327628 AKIRIN1Q9H9L7 192 aaPredicted RBP10.94□□□□□ -0.66
TRAK1-201ENST00000327628 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 A0A1W2PRX2 142 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 PINLYPA6NC86 204 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 MSRB2Q9Y3D2 182 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 S4R3C0 116 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 PCM1Q15154 2024 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 SCN3AQ9NY46 2000 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 NDUFS6O75380 124 aaKnown RBP10.93□□□□□ -0.66
TRAK1-201ENST00000327628 PYYP10082 97 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 C1orf194Q5T5A4 169 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 GATA2P23769 480 aaPredicted RBP10.93□□□□□ -0.66
TRAK1-201ENST00000327628 BRWD3Q6RI45 1802 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 PSG1P11464 419 aa10.93□□□□□ -0.66
TRAK1-201ENST00000327628 FAM110DQ8TAY7 271 aaPredicted RBP10.93□□□□□ -0.66
TRAK1-201ENST00000327628 TDGF1P3P51864 188 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 DERL1Q9BUN8 251 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
TRAK1-201ENST00000327628 ERCC8Q13216 396 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 SS18Q15532 418 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 IGKV1-12A0A0C4DH73 117 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 IGKV1D-12P01611 117 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 GATA4P43694 442 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
TRAK1-201ENST00000327628 UNQ6494/PRO21346Q6UXR6 183 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 JPT2Q9H910 190 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 PNRC2Q9NPJ4 139 aaKnown RBP10.92□□□□□ -0.66
TRAK1-201ENST00000327628 SIGLEC9Q9Y336 463 aa10.92□□□□□ -0.66
TRAK1-201ENST00000327628 Q6P435 159 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 ZNF479Q96JC4 524 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 CASP8AP2Q9UKL3 1982 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 LINC00158P58513 81 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 GSN-AS1Q9NRJ2 163 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 TRPT1Q86TN4 253 aaKnown RBP10.91□□□□□ -0.66
TRAK1-201ENST00000327628 MGST2Q99735 147 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 NHP2Q9NX24 153 aaKnown RBP10.91□□□□□ -0.66
TRAK1-201ENST00000327628 H0YIZ8 118 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 ETV2O00321 342 aaPredicted RBP10.91□□□□□ -0.66
TRAK1-201ENST00000327628 CLPSP04118 112 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 UBE2E1P51965 193 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 LCN12Q6JVE5 192 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 TMEM75Q8N9X5 138 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 TMEM141Q96I45 108 aa10.91□□□□□ -0.66
TRAK1-201ENST00000327628 H3BUT2 72 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 CST9LQ9H4G1 147 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 TRAV2A0A0B4J234 112 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 KLF17Q5JT82 389 aaPredicted RBP10.9□□□□□ -0.66
TRAK1-201ENST00000327628 IGFL3Q6UXB1 125 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 RMI2Q96E14 147 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 MTCL1Q9Y4B5 1905 aaKnown RBP10.9□□□□□ -0.66
TRAK1-201ENST00000327628 LEPROTO15243 131 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 GZMBP10144 247 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 BOD1L2Q8IYS8 172 aa10.9□□□□□ -0.66
TRAK1-201ENST00000327628 CD33P20138 364 aa10.9□□□□□ -0.67
TRAK1-201ENST00000327628 SHANK2-AS3Q9BTD1 123 aa10.9□□□□□ -0.67
TRAK1-201ENST00000327628 WFDC1Q9HC57 220 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms