RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 CDKN1AP38936 164 aa12.03□□□□□ -0.48
TCOF1-201ENST00000323668 ZNF134P52741 427 aa12.03□□□□□ -0.48
TCOF1-201ENST00000323668 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-201ENST00000323668 Q6ZWC4 215 aa12.03□□□□□ -0.48
TCOF1-201ENST00000323668 LOC105371242A0A075B767 164 aa12.02□□□□□ -0.48
TCOF1-201ENST00000323668 A0A1W2PS18 150 aa12.02□□□□□ -0.48
TCOF1-201ENST00000323668 GCSHP23434 173 aa12.02□□□□□ -0.48
TCOF1-201ENST00000323668 SCGB1D4Q6XE38 83 aa12.02□□□□□ -0.48
TCOF1-201ENST00000323668 RNASE6Q93091 150 aaKnown RBP12.02□□□□□ -0.48
TCOF1-201ENST00000323668 C11orf52Q96A22 123 aa12.02□□□□□ -0.48
TCOF1-201ENST00000323668 FABP2P12104 132 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 PRSS8Q16651 343 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 A1L4Q6 167 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 CGB1A6NKQ9 187 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 CFHR2P36980 270 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 C21orf62Q9NYP8 219 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 V9GYV3 84 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 CREBBPQ92793 2442 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 MUC21Q5SSG8 566 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 ORMDL3Q8N138 153 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 LINC01560Q8TB33 94 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
TCOF1-201ENST00000323668 IGKV3-7A0A075B6H7 116 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 TCRAP04437 139 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 RAB9AP51151 201 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 C11orf53Q8IXP5 236 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 NCOR1P1Q9H4R4 102 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 ST20Q9HBF5 79 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 PSG8Q9UQ74 426 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
TCOF1-201ENST00000323668 TRGV9Q99603 122 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 TNFRSF14Q92956 283 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 RNF125Q96EQ8 232 aa12.01□□□□□ -0.49
TCOF1-201ENST00000323668 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 METTL26Q96S19 204 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 GGTLC3B5MD39 225 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 PSG1P11464 419 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 NPPCP23582 126 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 TMPRSS3P57727 454 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
TCOF1-201ENST00000323668 LPAR2Q9HBW0 351 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 FBLL1A6NHQ2 334 aaKnown RBP12□□□□□ -0.49
TCOF1-201ENST00000323668 TMEM178BH3BS89 294 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 SCGB1C2P0DMR2 95 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 ADAMTS9Q9P2N4 1935 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 COL6A6A6NMZ7 2263 aa12□□□□□ -0.49
TCOF1-201ENST00000323668 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
TCOF1-201ENST00000323668 C10orf142B7Z368 130 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 ALKBH7Q9BT30 221 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-201ENST00000323668 IGLV2-14P01704 120 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 IGHV1-8P0DP01 117 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 ODF3L1Q8IXM7 274 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 C16orf92Q96LL3 132 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 C18orf15Q96N68 181 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 IGLV1-44P01699 117 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 MGPP08493 103 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.49
TCOF1-201ENST00000323668 ZNF841Q6ZN19 808 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 ERASQ7Z444 233 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 OR5AN1Q8NGI8 311 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 MED13Q9UHV7 2174 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 GPR183P32249 361 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 PRR20EP86478 221 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 PRR20CP86479 221 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 PRR20DP86480 221 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 PRR20BP86481 221 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 PRR20AP86496 221 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 ZNF329Q86UD4 541 aa11.99□□□□□ -0.49
TCOF1-201ENST00000323668 NBR2O15453 112 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 FBLN7Q53RD9 439 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 EXOC3-AS1Q8N2X6 119 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 C18orf32Q8TCD1 76 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 MALRD1Q5VYJ5 2156 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 LOXL3P58215 753 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 PRR14LQ5THK1 2151 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 TSPOP30536 169 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 GATA4P43694 442 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 PDLIM4P50479 330 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 UBTD1Q9HAC8 227 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 C7orf71A4D174 169 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 M0QZ24 198 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 NDUFA4L2Q9NRX3 87 aa11.98□□□□□ -0.49
TCOF1-201ENST00000323668 LYNX1G3V0Z9 82 aa11.97□□□□□ -0.49
TCOF1-201ENST00000323668 IGHV3-23P01764 117 aa11.97□□□□□ -0.49
TCOF1-201ENST00000323668 LYNX1P0DP58 116 aa11.97□□□□□ -0.49
TCOF1-201ENST00000323668 SLC25A39Q9BZJ4 359 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-201ENST00000323668 TRBV20OR9-2A0A075B6H5 130 aa11.97□□□□□ -0.49
TCOF1-201ENST00000323668 PLP1P60201 277 aa11.97□□□□□ -0.49
TCOF1-201ENST00000323668 LYRM7Q5U5X0 104 aa11.97□□□□□ -0.49
TCOF1-201ENST00000323668 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
TCOF1-201ENST00000323668 DLX6P56179 175 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms