RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 Q71RC1 249 aaPredicted RBP17.54■□□□□ 0.4
IRF3-201ENST00000309877 ZNF329Q86UD4 541 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 USMG5Q96IX5 58 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 TREM1Q9NP99 234 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 ESM1Q9NQ30 184 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 SONP18583 2426 aaKnown RBP17.53■□□□□ 0.4
IRF3-201ENST00000309877 FAM181BA6NEQ2 426 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 HYPMO75409 117 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 CLEC3BP05452 202 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 GPR183P32249 361 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 LYZP61626 148 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 SLC35B1P78383 322 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 TOR2AQ5JU69 321 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 MIR17HGQ75NE6 70 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 OR51G1Q8NGK1 321 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 Q8WTZ3 238 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 MRPL32Q9BYC8 188 aaKnown RBP17.53■□□□□ 0.4
IRF3-201ENST00000309877 GNG13Q9P2W3 67 aa17.53■□□□□ 0.4
IRF3-201ENST00000309877 CLDN34H7C241 214 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 CTSGP08311 255 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 STAG3L2P0CL84 134 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 STAG3L3P0CL85 134 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 PLP1P60201 277 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 SRSF3P84103 164 aaKnown RBP17.52■□□□□ 0.4
IRF3-201ENST00000309877 CLEC19AQ6UXS0 136 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 PATE2Q6UY27 113 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 Q8N2B8 174 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 CCDC140Q96MF4 163 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 KLK15Q9H2R5 256 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 TMEM231Q9H6L2 316 aa17.52■□□□□ 0.4
IRF3-201ENST00000309877 TECRQ9NZ01 308 aaKnown RBP17.52■□□□□ 0.4
IRF3-201ENST00000309877 RBFOX3A6NFN3 312 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 CXorf1O96002 111 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 IGHG4P01861 327 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 RAB9AP51151 201 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 TAS2R45P59539 299 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 PEA15Q15121 130 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 HAGHQ16775 308 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 NARS2Q96I59 477 aaKnown RBP17.52■□□□□ 0.39
IRF3-201ENST00000309877 TMPRSS5Q9H3S3 457 aa17.52■□□□□ 0.39
IRF3-201ENST00000309877 A0A0G2JLM5 398 aa17.51■□□□□ 0.39
IRF3-201ENST00000309877 IFNA1P01562 189 aa17.51■□□□□ 0.39
IRF3-201ENST00000309877 ATP6V0BQ99437 205 aa17.51■□□□□ 0.39
IRF3-201ENST00000309877 CHRDL1Q9BU40 450 aa17.51■□□□□ 0.39
IRF3-201ENST00000309877 TMEM89A2RUT3 159 aa17.5■□□□□ 0.39
IRF3-201ENST00000309877 ARL14EPLP0DKL9 152 aa17.5■□□□□ 0.39
IRF3-201ENST00000309877 LINC00305Q7Z4B0 112 aa17.5■□□□□ 0.39
IRF3-201ENST00000309877 UHRF2Q96PU4 802 aa17.5■□□□□ 0.39
IRF3-201ENST00000309877 GNB4Q9HAV0 340 aa17.5■□□□□ 0.39
IRF3-201ENST00000309877 HIGD1AQ9Y241 93 aa17.5■□□□□ 0.39
IRF3-201ENST00000309877 IL4P05112 153 aa17.49■□□□□ 0.39
IRF3-201ENST00000309877 CRYBA1P05813 215 aa17.49■□□□□ 0.39
IRF3-201ENST00000309877 CD5P06127 495 aa17.49■□□□□ 0.39
IRF3-201ENST00000309877 C8orf88P0DMB2 117 aa17.49■□□□□ 0.39
IRF3-201ENST00000309877 LCNL1Q6ZST4 164 aa17.49■□□□□ 0.39
IRF3-201ENST00000309877 RARRES2Q99969 163 aa17.49■□□□□ 0.39
IRF3-201ENST00000309877 INAFM1C9JVW0 142 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 TGOLN2O43493 480 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 PSMB8P28062 276 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 ADMP35318 185 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 PSMB3P49720 205 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 KHDC3LQ587J8 217 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 TEX38Q6PEX7 206 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 ZNF491Q8N8L2 437 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 RNF125Q96EQ8 232 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 WI2-2373I1.2A0A1W2PRP0 233 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 RNASE1P07998 156 aaKnown RBP17.48■□□□□ 0.39
IRF3-201ENST00000309877 PPT1P50897 306 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 HILS1P60008 231 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 PMS2P11Q13670 270 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 SCRT1Q9BWW7 348 aa17.48■□□□□ 0.39
IRF3-201ENST00000309877 OR7C2O60412 319 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 OR2C1O95371 312 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 IGHV3-11P01762 117 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 BCL2P10415 239 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 GCHFRP30047 84 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 HIVEP2P31629 2446 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 ZNF506Q5JVG8 444 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 ZNF600Q6ZNG1 722 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 PQLC2Q6ZP29 291 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 Q6ZSV7 163 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 JMJD8Q96S16 334 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 MANBALQ9NQG1 85 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 SERTAD4Q9NUC0 356 aa17.47■□□□□ 0.39
IRF3-201ENST00000309877 PUS1Q9Y606 427 aaKnown RBP eCLIP17.47■□□□□ 0.39
IRF3-201ENST00000309877 ANK3Q12955 4377 aaKnown RBP17.47■□□□□ 0.39
IRF3-201ENST00000309877 TRAV5A0A0B4J249 113 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 LOC102723971A0A1B0GUV8 181 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 ANKRD34BA5PLL1 514 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 MORN5Q5VZ52 161 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 C10orf99Q6UWK7 81 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 S100A7AQ86SG5 101 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 OR5AU1Q8NGC0 362 aa17.46■□□□□ 0.39
IRF3-201ENST00000309877 MRPL27Q9P0M9 148 aaKnown RBP17.46■□□□□ 0.39
IRF3-201ENST00000309877 FLNBO75369 2602 aaKnown RBP17.45■□□□□ 0.38
IRF3-201ENST00000309877 KRBOX1C9JBD0 128 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 ELANEP08246 267 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 RPL15P61313 204 aaKnown RBP17.45■□□□□ 0.38
IRF3-201ENST00000309877 FOXE3Q13461 319 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 OR4X2Q8NGF9 303 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms