RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 C4orf46Q504U0 113 aa19.48■□□□□ 0.71
CDKN2A-201ENST00000304494 LYG2Q86SG7 212 aa19.48■□□□□ 0.71
CDKN2A-201ENST00000304494 FAM24BQ8N5W8 94 aa19.48■□□□□ 0.71
CDKN2A-201ENST00000304494 GLMPQ8WWB7 406 aa19.48■□□□□ 0.71
CDKN2A-201ENST00000304494 MAGT1Q9H0U3 335 aa19.48■□□□□ 0.71
CDKN2A-201ENST00000304494 PFDN2Q9UHV9 154 aa19.48■□□□□ 0.71
CDKN2A-201ENST00000304494 DYNC2H1Q8NCM8 4307 aaKnown RBP19.47■□□□□ 0.71
CDKN2A-201ENST00000304494 IFNA21P01568 189 aa19.47■□□□□ 0.71
CDKN2A-201ENST00000304494 NUP62P37198 522 aaPredicted RBP19.47■□□□□ 0.71
CDKN2A-201ENST00000304494 LEMD1Q68G75 181 aa19.47■□□□□ 0.71
CDKN2A-201ENST00000304494 RNF125Q96EQ8 232 aa19.47■□□□□ 0.71
CDKN2A-201ENST00000304494 WRBO00258 174 aa19.46■□□□□ 0.71
CDKN2A-201ENST00000304494 ADAP1O75689 374 aa19.46■□□□□ 0.71
CDKN2A-201ENST00000304494 DCANP1Q8TF63 244 aa19.46■□□□□ 0.71
CDKN2A-201ENST00000304494 BUB3O43684 328 aa19.45■□□□□ 0.7
CDKN2A-201ENST00000304494 ANXA7P20073 488 aaKnown RBP19.45■□□□□ 0.7
CDKN2A-201ENST00000304494 OR8G2PQ6IF36 304 aa19.45■□□□□ 0.7
CDKN2A-201ENST00000304494 STHQ8IWL8 128 aa19.45■□□□□ 0.7
CDKN2A-201ENST00000304494 GATAD1Q8WUU5 269 aa19.45■□□□□ 0.7
CDKN2A-201ENST00000304494 IGKV1D-37A0A075B6S9 117 aa19.44■□□□□ 0.7
CDKN2A-201ENST00000304494 A0A0J9YWU9 116 aa19.44■□□□□ 0.7
CDKN2A-201ENST00000304494 ID3Q02535 119 aa19.44■□□□□ 0.7
CDKN2A-201ENST00000304494 ZNF90Q03938 601 aa19.44■□□□□ 0.7
CDKN2A-201ENST00000304494 PBDC1Q9BVG4 233 aa19.44■□□□□ 0.7
CDKN2A-201ENST00000304494 LCE6AA0A183 80 aa19.43■□□□□ 0.7
CDKN2A-201ENST00000304494 ZNF688P0C7X2 276 aa19.43■□□□□ 0.7
CDKN2A-201ENST00000304494 SPANXN5Q5MJ07 72 aa19.43■□□□□ 0.7
CDKN2A-201ENST00000304494 TRGV9Q99603 122 aa19.43■□□□□ 0.7
CDKN2A-201ENST00000304494 LYSTQ99698 3801 aa19.43■□□□□ 0.7
CDKN2A-201ENST00000304494 STRAPQ9Y3F4 350 aaKnown RBP19.43■□□□□ 0.7
CDKN2A-201ENST00000304494 SNRPGP15A8MWD9 76 aa19.42■□□□□ 0.7
CDKN2A-201ENST00000304494 LYRM1O43325 122 aa19.42■□□□□ 0.7
CDKN2A-201ENST00000304494 SIGLEC15Q6ZMC9 328 aa19.42■□□□□ 0.7
CDKN2A-201ENST00000304494 TMEM217Q8N7C4 229 aa19.42■□□□□ 0.7
CDKN2A-201ENST00000304494 NRN1Q9NPD7 142 aa19.42■□□□□ 0.7
CDKN2A-201ENST00000304494 RYR2Q92736 4967 aa19.42■□□□□ 0.7
CDKN2A-201ENST00000304494 PLA2G10O15496 165 aa19.41■□□□□ 0.7
CDKN2A-201ENST00000304494 CA1P00915 261 aaPredicted RBP19.41■□□□□ 0.7
CDKN2A-201ENST00000304494 NKX2-1P43699 371 aaPredicted RBP19.41■□□□□ 0.7
CDKN2A-201ENST00000304494 THAP8Q8NA92 274 aa19.41■□□□□ 0.7
CDKN2A-201ENST00000304494 OR4D5Q8NGN0 318 aa19.41■□□□□ 0.7
CDKN2A-201ENST00000304494 C20orf85Q9H1P6 137 aa19.41■□□□□ 0.7
CDKN2A-201ENST00000304494 PRSS46E5RG02 174 aa19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 H3BP45 60 aa19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 ATF4P18848 351 aaPredicted RBP19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 SNRPD3P62318 126 aaKnown RBP19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 POLR2GP62487 172 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 LINC00299Q6ZSB3 139 aa19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 MITD1Q8WV92 249 aa19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 CCDC32Q9BV29 185 aa19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 SEPSECSQ9HD40 501 aaKnown RBP19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 SACSQ9NZJ4 4579 aa19.4■□□□□ 0.7
CDKN2A-201ENST00000304494 CFDP00746 253 aaPredicted RBP19.39■□□□□ 0.69
CDKN2A-201ENST00000304494 LYZP61626 148 aa19.39■□□□□ 0.69
CDKN2A-201ENST00000304494 RARRES2Q99969 163 aa19.39■□□□□ 0.69
CDKN2A-201ENST00000304494 FBXL17Q9UF56 701 aa19.39■□□□□ 0.69
CDKN2A-201ENST00000304494 IGKV1OR2-108A0A075B7D4 117 aa19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 OR2F1Q13607 317 aa19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 TMEM41BQ5BJD5 291 aa19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 PSMG4Q5JS54 123 aa19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 C1orf194Q5T5A4 169 aa19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 MORN3Q6PF18 240 aaPredicted RBP19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 TRPT1Q86TN4 253 aaKnown RBP19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 PSENENQ9NZ42 101 aa19.38■□□□□ 0.69
CDKN2A-201ENST00000304494 SPP1P10451 314 aa19.37■□□□□ 0.69
CDKN2A-201ENST00000304494 IAH1Q2TAA2 248 aaPredicted RBP19.37■□□□□ 0.69
CDKN2A-201ENST00000304494 TENM2Q9NT68 2774 aa19.37■□□□□ 0.69
CDKN2A-201ENST00000304494 SSSCA1O60232 199 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 JTBO76095 146 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 TCRBP04435 133 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 AKR1C1Q04828 323 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 ACTL10Q5JWF8 245 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 OR11H2Q8NH07 326 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 PPP1R14BQ96C90 147 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 SMIM8Q96KF7 97 aa19.36■□□□□ 0.69
CDKN2A-201ENST00000304494 CXorf65A6NEN9 183 aa19.35■□□□□ 0.69
CDKN2A-201ENST00000304494 KNCNA6PVL3 124 aa19.35■□□□□ 0.69
CDKN2A-201ENST00000304494 ACOT7LQ6ZUV0 252 aa19.35■□□□□ 0.69
CDKN2A-201ENST00000304494 RAB40CQ96S21 281 aa19.35■□□□□ 0.69
CDKN2A-201ENST00000304494 SCGB1D2O95969 90 aa19.34■□□□□ 0.69
CDKN2A-201ENST00000304494 EWSR1Q01844 656 aaKnown RBP eCLIP19.34■□□□□ 0.69
CDKN2A-201ENST00000304494 S100ZQ8WXG8 99 aa19.34■□□□□ 0.69
CDKN2A-201ENST00000304494 PMS2P11Q13670 270 aa19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 TMEM144Q7Z5S9 345 aa19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 ZBTB8BQ8NAP8 495 aaPredicted RBP19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 BPIFCQ8NFQ6 507 aa19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 NUDT15Q9NV35 164 aa19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 GSKIPQ9P0R6 139 aa19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 SLC45A2Q9UMX9 530 aa19.33■□□□□ 0.68
CDKN2A-201ENST00000304494 TRAV6A0A075B6T7 132 aa19.32■□□□□ 0.68
CDKN2A-201ENST00000304494 NUPR2A6NF83 97 aa19.32■□□□□ 0.68
CDKN2A-201ENST00000304494 S100A7P31151 101 aa19.32■□□□□ 0.68
CDKN2A-201ENST00000304494 TAS2R30P59541 319 aa19.32■□□□□ 0.68
CDKN2A-201ENST00000304494 C11orf68Q9H3H3 251 aaKnown RBP19.32■□□□□ 0.68
CDKN2A-201ENST00000304494 SMCO3A2RU48 225 aa19.31■□□□□ 0.68
CDKN2A-201ENST00000304494 OR8I2Q8N0Y5 310 aa19.31■□□□□ 0.68
CDKN2A-201ENST00000304494 TSC22D2O75157 780 aa19.3■□□□□ 0.68
CDKN2A-201ENST00000304494 ID1P41134 155 aa19.3■□□□□ 0.68
CDKN2A-201ENST00000304494 PAX9P55771 341 aa19.3■□□□□ 0.68
CDKN2A-201ENST00000304494 ZNF846Q147U1 533 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms