RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 CDIP1Q9H305 208 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 HEYLQ9NQ87 328 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 CNIH1O95406 144 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 HBBP68871 147 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 PLEKHA3Q9HB20 300 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 B5MCH6 92 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 SMIM13P0DJ93 91 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 TTTY13Q9BZ97 58 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 A0A1W2PRD5 423 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 A0A1W2PRF3 423 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 A0A1W2PRM7 423 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 CHEK1O14757 476 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 FAM106CPP0CH98 169 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 VDAC2P45880 294 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 NMUP48645 174 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 FAM106AQ4KMX7 169 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 DEFB127Q9H1M4 99 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 ERG28Q9UKR5 140 aa12.75□□□□□ -0.37
CTDSP1-201ENST00000273062 TRAV3A0A0B4J244 114 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 A8MWL6 223 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 C16orf97H3BN30 126 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 GFRA3O60609 400 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 MORN5Q5VZ52 161 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 OR8A1Q8NGG7 326 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 IGHV3-64DA0A0J9YX35 117 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 CRYGCP07315 174 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 SP1P08047 785 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 CEBPDP49716 269 aaPredicted RBP12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 PGLYRP4Q96LB8 373 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 PRRG4Q9BZD6 226 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
CTDSP1-201ENST00000273062 PRR20EP86478 221 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 PRR20CP86479 221 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 PRR20DP86480 221 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 PRR20BP86481 221 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 PRR20AP86496 221 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 FAM162BQ5T6X4 162 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 LINC00322Q6ZN03 302 aaPredicted RBP12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 MDS2Q8NDY4 140 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 C12orf49Q9H741 205 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 TMEM167BQ9NRX6 74 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 BOD1L1Q8NFC6 3051 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 XGP55808 180 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 TAS2R45P59539 299 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 Q6P435 159 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 ZNF497Q6ZNH5 498 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 SYT8Q8NBV8 401 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 DEFB124Q8NES8 71 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 OSR1Q8TAX0 266 aaPredicted RBP12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 GALMQ96C23 342 aa12.73□□□□□ -0.37
CTDSP1-201ENST00000273062 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 F8W1H4 67 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 KIR2DL2P43627 348 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 TMPRSS3P57727 454 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 FXYD7P58549 80 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 LOXL1Q08397 574 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 COLCA1Q6ZS62 124 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 BCL6BQ8N143 479 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 Q8TCH9 128 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 NABP2Q9BQ15 211 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 PCBD1P61457 104 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 HOXA4Q00056 320 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 SMIM20Q8N5G0 67 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 OR9G4Q8NGQ1 327 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 GPR82Q96P67 336 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 C7orf69Q9H7B7 122 aa12.72□□□□□ -0.37
CTDSP1-201ENST00000273062 LTAP01374 205 aa12.71□□□□□ -0.37
CTDSP1-201ENST00000273062 ATP5L2Q7Z4Y8 100 aa12.71□□□□□ -0.37
CTDSP1-201ENST00000273062 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
CTDSP1-201ENST00000273062 OR2H2O95918 312 aa12.71□□□□□ -0.38
CTDSP1-201ENST00000273062 ZADH2Q8N4Q0 377 aa12.71□□□□□ -0.38
CTDSP1-201ENST00000273062 FAM234AQ9H0X4 552 aa12.71□□□□□ -0.38
CTDSP1-201ENST00000273062 NHP2Q9NX24 153 aaKnown RBP12.71□□□□□ -0.38
CTDSP1-201ENST00000273062 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.38
CTDSP1-201ENST00000273062 NGFP01138 241 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 APOHP02749 345 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 GNG5P63218 68 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 CATR1Q13166 79 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 GLMPQ8WWB7 406 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 IGKV1OR2-108A0A075B7D4 117 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 A0A096LNJ9 63 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 IGHV3-43A0A0B4J1X8 118 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 SIVA1O15304 175 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 IGHV3-43DP0DP04 118 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 CFHR2P36980 270 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 CACNG7P62955 275 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
CTDSP1-201ENST00000273062 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms