RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 IGLV2-8P01709 118 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 GPR6P46095 362 aaPredicted RBP12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TIMM23BQ5SRD1 257 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 GCSAMQ8N6F7 178 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 DEFB108BQ8NET1 73 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FAM216AQ8WUB2 273 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TMEM70Q9BUB7 260 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FNDC4Q9H6D8 234 aaPredicted RBP12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TNFRSF19Q9NS68 423 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 IZUMO1RA6ND01 250 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SH2D7A6NKC9 451 aaPredicted RBP12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PROP1O75360 226 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 UTF1Q5T230 341 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ZCCHC24Q8N2G6 241 aaKnown RBP12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ITLN1Q8WWA0 313 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 DSCAMO60469 2012 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 HCFC1P51610 2035 aa12.96□□□□□ -0.33
MAP1LC3B-201ENST00000268607 LRRK2Q5S007 2527 aa12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SPG11Q96JI7 2443 aa12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 J3QR06 171 aa12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PRB1P04280 392 aa12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 APOBEC3AP31941 199 aaPredicted RBP12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 DUX4L9Q6RFH8 374 aaPredicted RBP12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 C5orf17Q8NAS9 161 aa12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 RND1Q92730 232 aa12.96□□□□□ -0.34
MAP1LC3B-201ENST00000268607 TET2Q6N021 2002 aaPredicted RBP12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 C7orf71A4D174 169 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 GGTLC3B5MD39 225 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 DUTP33316 252 aaKnown RBP12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 RBPJQ06330 500 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 GDF5OSQ5U4N7 250 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 LEAP2Q969E1 77 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 FAM231BA6NCW3 169 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 NDUFS8O00217 210 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 LINC01560Q8TB33 94 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 COMMD5Q9GZQ3 224 aa12.95□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SRRM5B3KS81 715 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 MFAP2P55001 183 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SAMD13Q5VXD3 122 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 GNG12Q9UBI6 72 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 TCF19Q9Y242 345 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 CSMD1Q96PZ7 3565 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 GPR12P47775 334 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 LINC00479Q96M42 142 aa12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 MCRIP2Q9BUT9 160 aaKnown RBP12.94□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PPIAL4DF5H284 164 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 C15orf65H3BRN8 121 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 GLRXP35754 106 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PRR20EP86478 221 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PRR20CP86479 221 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PRR20DP86480 221 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PRR20BP86481 221 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PRR20AP86496 221 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 FOXE3Q13461 319 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 RAB31Q13636 194 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 WFDC12Q8WWY7 111 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PLEKHA3Q9HB20 300 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 TMEM167BQ9NRX6 74 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 C16orf97H3BN30 126 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SPINT2O43291 252 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 ERVK-16P61578 105 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 IGF2BP2-AS1Q96M15 143 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PPOXP50336 477 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 RPL39P5Q59GN2 51 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 UFSP1Q6NVU6 142 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 OR52E5Q8NH55 327 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 NABP2Q9BQ15 211 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 NAA38Q9BRA0 125 aaKnown RBP12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 CELSR2Q9HCU4 2923 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 MED13LQ71F56 2210 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SNAI2O43623 268 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 THBDP07204 575 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 MOB3BQ86TA1 216 aa12.92□□□□□ -0.34
MAP1LC3B-201ENST00000268607 PPIAL4GP0DN37 164 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 CAMPP49913 170 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 ZNF134P52741 427 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 FAM169BQ8N8A8 192 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SAP30LQ9HAJ7 183 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SLC25A10Q9UBX3 287 aaPredicted RBP12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 MYOD1P15172 320 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 TCF24Q7RTU0 167 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SYS1-DBNDD2H3BUS1 97 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 URB1-AS1Q96HZ7 61 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 SCRT2Q9NQ03 307 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 FAM90A9PA6NNJ1 464 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 CD40P25942 277 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 ADORA2A-AS1P86434 159 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 BSPH1Q075Z2 132 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 MZT1Q08AG7 82 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 KLF5Q13887 457 aaPredicted RBP12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 FAM120AOSQ5T036 256 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms