RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 FAM169BQ8N8A8 192 aa14.08□□□□□ -0.15
SRF-201ENST00000265354 STXBP6Q8NFX7 210 aa14.08□□□□□ -0.15
SRF-201ENST00000265354 ZNF714Q96N38 554 aa14.08□□□□□ -0.15
SRF-201ENST00000265354 NGBQ9NPG2 151 aa14.08□□□□□ -0.15
SRF-201ENST00000265354 CKS2P33552 79 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 TWIST1Q15672 202 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 C9orf172C9J069 976 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 SMIM13P0DJ93 91 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 CX3CL1P78423 397 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 FAM27E3Q08E93 113 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 SRSF7Q16629 238 aaKnown RBP eCLIP14.08□□□□□ -0.168e-8■■□□□ 14.2
SRF-201ENST00000265354 MBNL2Q5VZF2 373 aaKnown RBP14.08□□□□□ -0.16
SRF-201ENST00000265354 SPRR3Q9UBC9 169 aa14.08□□□□□ -0.16
SRF-201ENST00000265354 ZC2HC1AQ96GY0 325 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 LOC105371242A0A075B767 164 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 PPIAL4CA0A0B4J2A2 164 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 IGHV1-69-2A0A0G2JMI3 117 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 PPIAL4GP0DN37 164 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 ANKRD39Q53RE8 183 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 OR52E5Q8NH55 327 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 NDFIP1Q9BT67 221 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 KLK15Q9H2R5 256 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 CELSR3Q9NYQ7 3312 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 IGKV3D-15A0A087WSY6 115 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 CD40P25942 277 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 PSG9Q00887 426 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 FER1L6-AS1Q8NA97 138 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 C9orf106Q8NAJ2 232 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 PTPRQQ9UMZ3 2332 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 IGHV2OR16-5A0A0B4J2B6 119 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 SLAQ13239 276 aa14.07□□□□□ -0.16
SRF-201ENST00000265354 KBTBD11-OT1A0A1B0GTJ5 212 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 NUP35Q8NFH5 326 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 GRAMD2BQ96HH9 432 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 TMEM265A0A087WTH1 108 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 S100A4P26447 101 aaKnown RBP14.06□□□□□ -0.16
SRF-201ENST00000265354 TRIP6Q15654 476 aaKnown RBP14.06□□□□□ -0.16
SRF-201ENST00000265354 GEMIN7Q9H840 131 aaKnown RBP14.06□□□□□ -0.16
SRF-201ENST00000265354 NHP2Q9NX24 153 aaKnown RBP14.06□□□□□ -0.16
SRF-201ENST00000265354 ZNF257Q9Y2Q1 563 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 FAM181BA6NEQ2 426 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 IGLC2P0DOY2 106 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 IGLC3P0DOY3 106 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 MBNL3Q9NUK0 354 aaKnown RBP14.06□□□□□ -0.16
SRF-201ENST00000265354 MYO18BQ8IUG5 2567 aa14.06□□□□□ -0.16
SRF-201ENST00000265354 K7EN84 100 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 FAM168AQ92567 244 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 HIST1H4GQ99525 98 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 MRPS18CQ9Y3D5 142 aaKnown RBP14.05□□□□□ -0.16
SRF-201ENST00000265354 A0A1W2PRE2 83 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
SRF-201ENST00000265354 LIPFP07098 398 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 PYGO2Q9BRQ0 406 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 ADAMTS9Q9P2N4 1935 aa14.05□□□□□ -0.16
SRF-201ENST00000265354 OR4C13Q8NGP0 309 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 GPR82Q96P67 336 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 SLC25A33Q9BSK2 321 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 AZU1P20160 251 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 RPL15P61313 204 aaKnown RBP14.04□□□□□ -0.16
SRF-201ENST00000265354 GCSAMQ8N6F7 178 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 TRBV6-6A0A0A6YYG2 114 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 TRAV8-6A0A0B4J262 113 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 IGHV3-23P01764 117 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 TANC2Q9HCD6 1990 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 YPEL1O60688 119 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 AREGP15514 252 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 RNFT1Q5M7Z0 435 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 CIARTQ8N365 385 aaPredicted RBP14.04□□□□□ -0.16
SRF-201ENST00000265354 PNKDQ8N490 385 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 YPEL2Q96QA6 119 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 SFXN3Q9BWM7 321 aa14.04□□□□□ -0.16
SRF-201ENST00000265354 TSSC4Q9Y5U2 329 aaPredicted RBP14.04□□□□□ -0.16
SRF-201ENST00000265354 CD69Q07108 199 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 OR10J3Q5JRS4 329 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 C5orf30Q96GV9 206 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 RPP21Q9H633 154 aaKnown RBP14.03□□□□□ -0.16
SRF-201ENST00000265354 SZT2Q5T011 3432 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 UPK2O00526 184 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 DUX4L9Q6RFH8 374 aaPredicted RBP14.03□□□□□ -0.16
SRF-201ENST00000265354 IGHV3-49A0A0A0MS15 119 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 IGLL1P15814 213 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 EXOC3-AS1Q8N2X6 119 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 C18orf32Q8TCD1 76 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 FBXL15Q9H469 300 aa14.03□□□□□ -0.16
SRF-201ENST00000265354 A0A0G2JLM5 398 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 COA6Q5JTJ3 125 aaKnown RBP14.02□□□□□ -0.16
SRF-201ENST00000265354 YPEL4Q96NS1 127 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 TMEM189A5PLL7 270 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 PRR33A8MZF0 331 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 GGTLC3B5MD39 225 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 ZNF134P52741 427 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 TMUB1Q9BVT8 246 aa14.02□□□□□ -0.16
SRF-201ENST00000265354 DLX1P56177 255 aa14.02□□□□□ -0.17
SRF-201ENST00000265354 YPEL3P61236 119 aaPredicted RBP14.02□□□□□ -0.17
SRF-201ENST00000265354 ZNF295-AS1Q8N0V1 137 aa14.02□□□□□ -0.17
SRF-201ENST00000265354 RAB1CQ92928 201 aa14.02□□□□□ -0.17
SRF-201ENST00000265354 Q9H3A6 140 aa14.02□□□□□ -0.17
SRF-201ENST00000265354 EPDR1Q9UM22 224 aa14.02□□□□□ -0.17
SRF-201ENST00000265354 TRAV9-1A0A075B6T8 112 aa14.01□□□□□ -0.17
SRF-201ENST00000265354 IL4P05112 153 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms