RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 ZNF503-AS2A6NEH8 195 aa14.1□□□□□ -0.15
SLC1A4-201ENST00000234256 LYL1P12980 280 aa14.1□□□□□ -0.15
SLC1A4-201ENST00000234256 FAM90A2PQ658T7 463 aa14.1□□□□□ -0.15
SLC1A4-201ENST00000234256 COLCA1Q6ZS62 124 aa14.1□□□□□ -0.15
SLC1A4-201ENST00000234256 LY6G6EA0A0G2JKS1 128 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 CFPP27918 469 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 PLP1P60201 277 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 U3KQA8 63 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 HAX1O00165 279 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 ETV2O00321 342 aaPredicted RBP14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 TMEM200BQ69YZ2 307 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 DDB2Q92466 427 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 GLMPQ8WWB7 406 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 PLXNA4Q9HCM2 1894 aa14.09□□□□□ -0.15
SLC1A4-201ENST00000234256 EXOC3-AS1Q8N2X6 119 aa14.08□□□□□ -0.15
SLC1A4-201ENST00000234256 LINC00479Q96M42 142 aa14.08□□□□□ -0.15
SLC1A4-201ENST00000234256 TRAV8-1A0A0A6YYK1 113 aa14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 PMS2P5A8MQ11 134 aa14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 FAM159AQ6UWV7 190 aa14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 RPRMLQ8N4K4 120 aa14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 ZNF474Q6S9Z5 364 aaPredicted RBP14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 RAXQ9Y2V3 346 aa14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 TMEM242Q9NWH2 141 aa14.08□□□□□ -0.16
SLC1A4-201ENST00000234256 RAB9AP51151 201 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 ZNF56Q15929 161 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 FER1L6-AS1Q8NA97 138 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 LAMTOR2Q9Y2Q5 125 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 PLXNB1O43157 2135 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 TRBV6-6A0A0A6YYG2 114 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 PSG1P11464 419 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 CIARTQ8N365 385 aaPredicted RBP14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 FMC1Q96HJ9 113 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 PIMREGQ9BSJ6 248 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 PSG8Q9UQ74 426 aa14.07□□□□□ -0.16
SLC1A4-201ENST00000234256 NPIPB5A8MRT5 1133 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 LCN12Q6JVE5 192 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 NUDT10Q8NFP7 164 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 NUDT11Q96G61 164 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 MIEN1Q9BRT3 115 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 C7orf69Q9H7B7 122 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 LY6DQ14210 128 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 SPACA3Q8IXA5 215 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 ORMDL3Q8N138 153 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 SCRT1Q9BWW7 348 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 OR11H12B2RN74 326 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 PAX9P55771 341 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 ZNF672Q499Z4 452 aaPredicted RBP14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 FAM71F2Q6NXP2 309 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 OR11H1Q8NG94 326 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 OR11H2Q8NH07 326 aa14.06□□□□□ -0.16
SLC1A4-201ENST00000234256 ARHGAP21Q5T5U3 1957 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 LINC00469Q8N7U9 141 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 A0A1B0GUS0 222 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 CSRP1P21291 193 aaKnown RBP14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 NEUROG1Q92886 237 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 FOXC2Q99958 501 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 TRAV9-1A0A075B6T8 112 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 CENPVQ7Z7K6 275 aaPredicted RBP14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 RHOGP84095 191 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 KLRD1Q13241 179 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 Q6ZS49 121 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 MBNL3Q9NUK0 354 aaKnown RBP14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 SORL1Q92673 2214 aa14.05□□□□□ -0.16
SLC1A4-201ENST00000234256 TMEM170BQ5T4T1 132 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 NEU4Q8WWR8 484 aaPredicted RBP14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 A0A1B0GW64 132 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 FBLN7Q53RD9 439 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 LYPD2Q6UXB3 125 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 DOPEY1Q5JWR5 2465 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 FRMPD3Q5JV73 1810 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 TICRRQ7Z2Z1 1910 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 PRSS8Q16651 343 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 KIR2DL4Q99706 377 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 ZNF257Q9Y2Q1 563 aa14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 SETD2Q9BYW2 2564 aaPredicted RBP14.04□□□□□ -0.16
SLC1A4-201ENST00000234256 IGKV3OR2-268A0A0C4DH90 116 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 IGKV1-39P01597 117 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 IGKV1D-39P04432 117 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 COX6B1P14854 86 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 PCP4P48539 62 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 RNF166Q96A37 237 aaPredicted RBP14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 ASCL2Q99929 193 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 TMEM178BH3BS89 294 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 LINC00614P0C842 121 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 IGHV1-8P0DP01 117 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 IGHV2-26A0A0B4J1V2 119 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 AREGP15514 252 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 FOXL1Q12952 345 aa14.03□□□□□ -0.16
SLC1A4-201ENST00000234256 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 WDR86Q86TI4 376 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 WNT2P09544 360 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 SFTA2Q6UW10 78 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 Q6ZR03 302 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 NIT1Q86X76 327 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 WFDC12Q8WWY7 111 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 GNB1LQ9BYB4 327 aa14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 BEX4Q9NWD9 120 aaPredicted RBP14.02□□□□□ -0.16
SLC1A4-201ENST00000234256 FAM90A9PA6NNJ1 464 aa14.02□□□□□ -0.17
SLC1A4-201ENST00000234256 RPL15P61313 204 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms