RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 FAM201AQ5SY85 155 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 K7EP13 123 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 C9orf118A6NHY6 69 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 CECR9P0C854 216 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 EVI2AP22794 236 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.58
HCFC2-201ENST00000229330 IGLV3-12A0A075B6K2 115 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 DLX4Q92988 240 aaPredicted RBP11.4□□□□□ -0.58
HCFC2-201ENST00000229330 S4R3C0 116 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 PTPRDP23468 1912 aa11.4□□□□□ -0.58
HCFC2-201ENST00000229330 TFF1P04155 84 aa11.4□□□□□ -0.59
HCFC2-201ENST00000229330 IGLL1P15814 213 aa11.4□□□□□ -0.59
HCFC2-201ENST00000229330 ASCL4Q6XD76 172 aa11.4□□□□□ -0.59
HCFC2-201ENST00000229330 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.59
HCFC2-201ENST00000229330 CELA3BP08861 270 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 RNF115Q9Y4L5 304 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 IGKV3D-15A0A087WSY6 115 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 IGKV3-15P01624 115 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 COA6Q5JTJ3 125 aaKnown RBP11.39□□□□□ -0.59
HCFC2-201ENST00000229330 FAM159AQ6UWV7 190 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 ASCL2Q99929 193 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 JMJD8Q96S16 334 aa11.39□□□□□ -0.59
HCFC2-201ENST00000229330 GLRXP35754 106 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 PLAURQ03405 335 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 ORMDL2Q53FV1 153 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 C8orf46Q8TAG6 207 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV2OR16-5A0A0B4J2B6 119 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 PRTN3P24158 256 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 IMMP1LQ96LU5 166 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
HCFC2-201ENST00000229330 VWA8A3KMH1 1905 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 TCRAP04437 139 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV3OR16-13A0A075B7E8 117 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV3-74A0A0B4J1X5 117 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
HCFC2-201ENST00000229330 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 LIME1Q9H400 295 aa11.38□□□□□ -0.59
HCFC2-201ENST00000229330 CNOT1A5YKK6 2376 aaKnown RBP11.37□□□□□ -0.59
HCFC2-201ENST00000229330 GFRA3O60609 400 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 FXYD7P58549 80 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 C21orf62Q9NYP8 219 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 EP300Q09472 2414 aaPredicted RBP11.37□□□□□ -0.59
HCFC2-201ENST00000229330 RNFT1Q5M7Z0 435 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 PVRIGQ6DKI7 326 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 TSSC4Q9Y5U2 329 aaPredicted RBP11.37□□□□□ -0.59
HCFC2-201ENST00000229330 SNRNP200O75643 2136 aaKnown RBP11.37□□□□□ -0.59
HCFC2-201ENST00000229330 RALGAPA1Q6GYQ0 2036 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 TRAV3A0A0B4J244 114 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 K7EP34 96 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV3-23P01764 117 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 FDCSPQ8NFU4 85 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 NCR2O95944 276 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 TMEM249Q2WGJ8 235 aa11.37□□□□□ -0.59
HCFC2-201ENST00000229330 MDC1Q14676 2089 aaKnown RBP11.36□□□□□ -0.59
HCFC2-201ENST00000229330 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
HCFC2-201ENST00000229330 F2Z2F3 143 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 CCL25O15444 150 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
HCFC2-201ENST00000229330 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 LAGE3Q14657 143 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 LINC00473A8K010 186 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 LHX2P50458 406 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 LYZL1Q6UWQ5 148 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
HCFC2-201ENST00000229330 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 PSPNO60542 156 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV1-2P23083 117 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
HCFC2-201ENST00000229330 FAM71F2Q6NXP2 309 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV3-66A0A0C4DH42 116 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 TMPRSS3P57727 454 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 ARHGEF17Q96PE2 2063 aaPredicted RBP11.35□□□□□ -0.59
HCFC2-201ENST00000229330 WIPF3A6NGB9 483 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 UBE2L6O14933 153 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 IGKV1D-33P01593 117 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 IGKV1-33P01594 117 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 PPIFP30405 207 aaKnown RBP11.35□□□□□ -0.59
HCFC2-201ENST00000229330 V9GYV3 84 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 LHFPL4Q7Z7J7 247 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 C1orf162Q8NEQ5 155 aaPredicted RBP11.35□□□□□ -0.59
HCFC2-201ENST00000229330 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
HCFC2-201ENST00000229330 E9PLN8 166 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 CEACAM8P31997 349 aaPredicted RBP11.34□□□□□ -0.59
HCFC2-201ENST00000229330 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
HCFC2-201ENST00000229330 BVES-AS1Q5T3Y7 98 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 ZNF114Q8NC26 417 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 SDK2Q58EX2 2172 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 IGKV1-6A0A0C4DH72 117 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 CD300EQ496F6 205 aaPredicted RBP11.34□□□□□ -0.59
HCFC2-201ENST00000229330 ZC2HC1BQ5TFG8 222 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 PF4V1P10720 104 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 TMEM155Q4W5P6 130 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms