RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SRRM4A7MD48 611 aaKnown RBP10.9□□□□□ -0.66
COL1A1-201ENST00000225964 CCL1P22362 96 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 FOXL1Q12952 345 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 Q71RC1 249 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-201ENST00000225964 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 NYNRINQ9P2P1 1898 aaKnown RBP10.9□□□□□ -0.66
COL1A1-201ENST00000225964 TMEM249Q2WGJ8 235 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 PAQR4Q8N4S7 273 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-201ENST00000225964 MAPK1IP1LQ8NDC0 245 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 LAMTOR3Q9UHA4 124 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 SLC25A16P16260 332 aa10.9□□□□□ -0.67
COL1A1-201ENST00000225964 GGNQ86UU5 652 aa10.9□□□□□ -0.67
COL1A1-201ENST00000225964 FNDC4Q9H6D8 234 aaPredicted RBP10.9□□□□□ -0.67
COL1A1-201ENST00000225964 A0A0A6YYD4 124 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 FAM90A9PA6NNJ1 464 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 CD5P06127 495 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 CEACAM8P31997 349 aaPredicted RBP10.89□□□□□ -0.67
COL1A1-201ENST00000225964 FOXG1P55316 489 aaPredicted RBP10.89□□□□□ -0.67
COL1A1-201ENST00000225964 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 IGKV1-9A0A0C4DH69 117 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 M0R1W7 72 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 RUSC1-AS1Q66K80 236 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 Q96MF0 132 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 SPSB3Q6PJ21 355 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 NIT1Q86X76 327 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 FLVCR1-AS1Q8TAF5 88 aa10.89□□□□□ -0.67
COL1A1-201ENST00000225964 PSG1P11464 419 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 COL8A2P25067 703 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 BPESC1Q9GZL8 116 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 LSM4Q9Y4Z0 139 aaKnown RBP10.88□□□□□ -0.67
COL1A1-201ENST00000225964 KNTC1P50748 2209 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 NCR2O95944 276 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 DEFB130BP0DP73 79 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 DEFB130AP0DP74 79 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 Q5PR19 223 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 BRWD1Q9NSI6 2320 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 SCN5AQ14524 2016 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 PPBPP02775 128 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 PRR31Q5SQ13 230 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 C1QTNF4Q9BXJ3 329 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 DOCK4Q8N1I0 1966 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 LY6HO94772 140 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 TEX43Q6ZNM6 134 aa10.88□□□□□ -0.67
COL1A1-201ENST00000225964 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-201ENST00000225964 A0A087WV48 116 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 A0A087WWC5 75 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 A0A1W2PRE2 83 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 GATA4P43694 442 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 IGFL4Q6B9Z1 124 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 SLC25A48Q6ZT89 311 aaKnown RBP10.87□□□□□ -0.67
COL1A1-201ENST00000225964 OSTCQ9NRP0 149 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 GREB1Q4ZG55 1949 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 KLF17Q5JT82 389 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-201ENST00000225964 C5orf30Q96GV9 206 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 DERL1Q9BUN8 251 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 CFHR3Q02985 330 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 ATXN8Q156A1 80 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 RASL10AQ92737 203 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 SS18Q15532 418 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 GAFA1Q96PS6 74 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 ZNF319Q9P2F9 582 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
COL1A1-201ENST00000225964 SPATA31B1PQ5VZV4 182 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 OCC1Q8TAD7 63 aa10.87□□□□□ -0.67
COL1A1-201ENST00000225964 C6orf226Q5I0X4 101 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 LAIR2Q6ISS4 152 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 FAM110DQ8TAY7 271 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-201ENST00000225964 RALGAPA1Q6GYQ0 2036 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 SH2D1AO60880 128 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 TCRAP04437 139 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 VSIRQ9H7M9 311 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 CGB3P0DN86 165 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 HEPN1Q6WQI6 88 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 ZNF138P52744 262 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 SYNJ2BPP57105 145 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
COL1A1-201ENST00000225964 SRRM5B3KS81 715 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 H0YJW9 148 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 SPTBP11277 2137 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 TSKUQ8WUA8 353 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 ERG28Q9UKR5 140 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
COL1A1-201ENST00000225964 CLDN16Q9Y5I7 305 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 A0A0G2JMZ2 1700 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 LRRC37A2A6NM11 1700 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 OOSP1A8MZH6 123 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 CHCHD1Q96BP2 118 aaKnown RBP10.85□□□□□ -0.67
COL1A1-201ENST00000225964 C1orf159Q96HA4 380 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 A0A1B0GWJ7 208 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 RNF222A6NCQ9 220 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms