RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RBFOX2O43251 390 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP11-201ENST00000218348 NDUFB4O95168 129 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 PAX2Q02962 417 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 KLRD1Q13241 179 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 FAM78BQ5VT40 261 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 Q8N7P7 452 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 C1orf159Q96HA4 380 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 OR2T8A6NH00 312 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 NUPR1O60356 82 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 IGHV1-8P0DP01 117 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 KIR2DS2P43631 304 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 TMEM183BQ1AE95 376 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 MRPL52Q86TS9 123 aaKnown RBP8.04□□□□□ -1.12
USP11-201ENST00000218348 TMEM256Q8N2U0 113 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 SMIM20Q8N5G0 67 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 IGKV1OR2-108A0A075B7D4 117 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 TRBV7-9A0A0J9YWB2 115 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 RPL8P62917 257 aaKnown RBP8.04□□□□□ -1.12
USP11-201ENST00000218348 C5orf64Q2M2E5 130 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 TEPPQ6URK8 271 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 MIR17HGQ75NE6 70 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 ADTRPQ96IZ2 230 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 C20orf144Q9BQM9 153 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 SRSF8Q9BRL6 282 aaKnown RBP8.04□□□□□ -1.12
USP11-201ENST00000218348 NPVFQ9HCQ7 196 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 FUT9Q9Y231 359 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 PDZD2O15018 2839 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 NPPCP23582 126 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 TMEM249Q2WGJ8 235 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 ZNF586Q9NXT0 402 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 S4R3C0 116 aa8.04□□□□□ -1.12
USP11-201ENST00000218348 TRAV1-1A0A0B4J248 108 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 K7EQM0 130 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 ZNF207O43670 478 aaKnown RBP8.03□□□□□ -1.12
USP11-201ENST00000218348 OPRK1P41145 380 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 TNXAQ16473 311 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 SP5Q6BEB4 398 aaPredicted RBP8.03□□□□□ -1.12
USP11-201ENST00000218348 NABP2Q9BQ15 211 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 PRNDQ9UKY0 176 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 FOXA2Q9Y261 457 aaPredicted RBP8.03□□□□□ -1.12
USP11-201ENST00000218348 A0A1W2PPR1 153 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 MEF2CQ06413 473 aaPredicted RBP8.03□□□□□ -1.12
USP11-201ENST00000218348 PLGLAQ15195 96 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 TRAV5A0A0B4J249 113 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 A0A1B0GW64 132 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 WT1-ASQ06250 92 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 TMEM241Q24JQ0 296 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 RUSC1-AS1Q66K80 236 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 C16orf82Q7Z2V1 217 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 SDF2L1Q9HCN8 221 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 BET1LQ9NYM9 111 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 TIMM9Q9Y5J7 89 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 INSIG2Q9Y5U4 225 aa8.03□□□□□ -1.12
USP11-201ENST00000218348 SCO2A0A1W2PP80 73 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 H3BTX0 84 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 PAFAH1B2P68402 229 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 TMEM155Q4W5P6 130 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 ZNF833PQ6ZTB9 187 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 ZNF114Q8NC26 417 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.02□□□□□ -1.13
USP11-201ENST00000218348 NPIPB3Q92617 1050 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 BTF3L4Q96K17 158 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 FAM103A1Q9BTL3 118 aaKnown RBP8.02□□□□□ -1.13
USP11-201ENST00000218348 TMEM133Q9H2Q1 129 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 FBXL15Q9H469 300 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
USP11-201ENST00000218348 IGHV2-26A0A0B4J1V2 119 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 PRSS46E5RG02 174 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 MOSP00540 346 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 PPOXP50336 477 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 FAM3BP58499 235 aaPredicted RBP8.02□□□□□ -1.13
USP11-201ENST00000218348 PRCDQ00LT1 54 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 HES1Q14469 280 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 EFNB3Q15768 340 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 KIR3DL3Q8N743 410 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 OR4C13Q8NGP0 309 aa8.02□□□□□ -1.13
USP11-201ENST00000218348 MRPL36Q9P0J6 103 aaKnown RBP8.02□□□□□ -1.13
USP11-201ENST00000218348 ABCA12Q86UK0 2595 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 AREGP15514 252 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 ZNF90Q03938 601 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 PSG5Q15238 335 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 BSXQ3C1V8 233 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 MORN5Q5VZ52 161 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 FCN1O00602 326 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 ARL3P36405 182 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 RPL23P62829 140 aaKnown RBP8.01□□□□□ -1.13
USP11-201ENST00000218348 ERHP84090 104 aaKnown RBP8.01□□□□□ -1.13
USP11-201ENST00000218348 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 OR1L8Q8NGR8 309 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 OR52E5Q8NH55 327 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 RPEQ96AT9 228 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 NEIL1Q96FI4 390 aaPredicted RBP8.01□□□□□ -1.13
USP11-201ENST00000218348 SGK494Q96LW2 274 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 WASHC3Q9Y3C0 194 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 YTHDF2Q9Y5A9 579 aaKnown RBP8.01□□□□□ -1.13
USP11-201ENST00000218348 G3V4G9 280 aa8.01□□□□□ -1.13
USP11-201ENST00000218348 RNASE2P10153 161 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms