RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 HTR1DP28221 377 aa13.59□□□□□ -0.23
CTDP1-201ENST00000075430 FOXE3Q13461 319 aa13.59□□□□□ -0.23
CTDP1-201ENST00000075430 DSCAML1Q8TD84 2053 aa13.59□□□□□ -0.23
CTDP1-201ENST00000075430 ZNF883P0CG24 379 aa13.59□□□□□ -0.23
CTDP1-201ENST00000075430 COL8A1P27658 744 aa13.59□□□□□ -0.23
CTDP1-201ENST00000075430 FNDC4Q9H6D8 234 aaPredicted RBP13.59□□□□□ -0.23
CTDP1-201ENST00000075430 TRAV17A0A0B4J275 112 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 CT45A6P0DMU7 189 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 CT45A5P0DMU8 189 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 CT45A7P0DMV0 189 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 ESDP10768 282 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 SLC25A2Q9BXI2 301 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 TPSG1Q9NRR2 321 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 PRNDQ9UKY0 176 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-201ENST00000075430 C17orf58Q2M2W7 97 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 CCL17Q92583 94 aa13.58□□□□□ -0.24
CTDP1-201ENST00000075430 LYZP61626 148 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 ORAOV1Q8WV07 137 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 CHRDL1Q9BU40 450 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 A0A1W2PRE2 83 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 SMIM27A0A1W2PRY6 76 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 SRRM5B3KS81 715 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 SLC25A34Q6PIV7 304 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 EXOC3-AS1Q8N2X6 119 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 AP1S3Q96PC3 154 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 KBTBD11-OT1A0A1B0GTJ5 212 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 UPK2O00526 184 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 TNFAIP6P98066 277 aaPredicted RBP13.57□□□□□ -0.24
CTDP1-201ENST00000075430 CD69Q07108 199 aa13.57□□□□□ -0.24
CTDP1-201ENST00000075430 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
CTDP1-201ENST00000075430 F11RQ9Y624 299 aaKnown RBP13.56□□□□□ -0.24
CTDP1-201ENST00000075430 ATRXP46100 2492 aa13.56□□□□□ -0.24
CTDP1-201ENST00000075430 HIST1H1EP10412 219 aaKnown RBP13.56□□□□□ -0.24
CTDP1-201ENST00000075430 WFDC8Q8IUA0 241 aa13.56□□□□□ -0.24
CTDP1-201ENST00000075430 ASH1LQ9NR48 2969 aaKnown RBP13.56□□□□□ -0.24
CTDP1-201ENST00000075430 TRAV9-1A0A075B6T8 112 aa13.56□□□□□ -0.24
CTDP1-201ENST00000075430 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
CTDP1-201ENST00000075430 TMUB1Q9BVT8 246 aa13.56□□□□□ -0.24
CTDP1-201ENST00000075430 CREBBPQ92793 2442 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 IGHV3OR16-8A0A075B7F1 116 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 IGHV2-26A0A0B4J1V2 119 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 PRCDQ00LT1 54 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 LRBAP50851 2863 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 SAP30O75446 220 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 PATE2Q6UY27 113 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 BHLHA15Q7RTS1 189 aaPredicted RBP13.55□□□□□ -0.24
CTDP1-201ENST00000075430 OR1L4Q8NGR5 311 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 FOXA2Q9Y261 457 aaPredicted RBP13.55□□□□□ -0.24
CTDP1-201ENST00000075430 IGLC7A0M8Q6 106 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 C2orf70A6NJV1 201 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 RBP4P02753 201 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 PRSS3P2Q8NHM4 247 aa13.55□□□□□ -0.24
CTDP1-201ENST00000075430 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 NBEAP1P0C6P0 100 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 HBBP68871 147 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 PRSS57Q6UWY2 283 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 ZADH2Q8N4Q0 377 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 GRAMD2BQ96HH9 432 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 IGF2BP2-AS1Q96M15 143 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 TMEM11P17152 192 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 TMPRSS3P57727 454 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 SRSF12Q8WXF0 261 aaKnown RBP13.54□□□□□ -0.24
CTDP1-201ENST00000075430 FAM167A-AS1Q96KT0 104 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 RELNP78509 3460 aa13.54□□□□□ -0.24
CTDP1-201ENST00000075430 SYS1-DBNDD2H3BUS1 97 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 RITA1Q96K30 269 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 NOTCH3Q9UM47 2321 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 K7EMI3 77 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 ZZEF1O43149 2961 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 OR1L8Q8NGR8 309 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 SLC25A10Q9UBX3 287 aaPredicted RBP13.53□□□□□ -0.24
CTDP1-201ENST00000075430 IGKV3-15P01624 115 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 OR5AL1P0C617 328 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 IGF2RP11717 2491 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 NHLH1Q02575 133 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 DDB2Q92466 427 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 CST9LQ9H4G1 147 aa13.53□□□□□ -0.24
CTDP1-201ENST00000075430 TRGV8A0A0C4DH27 118 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 IGHV3-35A0A0C4DH35 117 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 BPIFB3P59826 476 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 ARF6P62330 175 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 PSG9Q00887 426 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 TMEM249Q2WGJ8 235 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 MAP1LC3CQ9BXW4 147 aa13.52□□□□□ -0.24
CTDP1-201ENST00000075430 TRAV8-6A0A0B4J262 113 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 PLGLAQ15195 96 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 ZNF71Q9NQZ8 489 aaPredicted RBP13.52□□□□□ -0.25
CTDP1-201ENST00000075430 ZNF257Q9Y2Q1 563 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 GOSR1O95249 250 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1170.5 ms