RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 UBE2G1P62253 170 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 RUSC1-AS1Q66K80 236 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 SPTBN1Q01082 2364 aaKnown RBP11.81□□□□□ -0.52
SCARB2-221ENST00000640341 PPOXP50336 477 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 BSPH1Q075Z2 132 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 MAJINQ3KP22 176 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 WDR73Q6P4I2 378 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
SCARB2-221ENST00000640341 RAI1Q7Z5J4 1906 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-221ENST00000640341 IGLV2-8P01709 118 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 AMY1AP04745 511 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 BET1LQ9NYM9 111 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 LINC00312Q9Y6C7 94 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
SCARB2-221ENST00000640341 SPTAN1Q13813 2472 aaKnown RBP11.81□□□□□ -0.52
SCARB2-221ENST00000640341 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-221ENST00000640341 FAM222BQ8WU58 562 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 ASCL2Q99929 193 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 MIEN1Q9BRT3 115 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 DYNLRB1Q9NP97 96 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 OSTCQ9NRP0 149 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 NDUFA4L2Q9NRX3 87 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 ASH1LQ9NR48 2969 aaKnown RBP11.8□□□□□ -0.52
SCARB2-221ENST00000640341 A0A1B0GWJ7 208 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 PGPA6NDG6 321 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 M0QZ24 198 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 HSBP1O75506 76 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 RAB4AP20338 218 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 GATA4P43694 442 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 TNXAQ16473 311 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 OR4C13Q8NGP0 309 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-221ENST00000640341 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 NDUFB3O43676 98 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF137PP52743 207 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 MMDQ15546 238 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 PMCHL1Q16048 86 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 TCF24Q7RTU0 167 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 FAM167A-AS1Q96KT0 104 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 NEU1Q99519 415 aa11.8□□□□□ -0.52
SCARB2-221ENST00000640341 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 H0Y8G0 127 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
SCARB2-221ENST00000640341 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 CNTFRP26992 372 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 Q56UQ5 140 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 PATE2Q6UY27 113 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 KCNS1Q96KK3 526 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF835Q9Y2P0 537 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 DPRXA6NFQ7 191 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 C17orf100A8MU93 164 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 PEX7O00628 323 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 ADIPOQQ15848 244 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 KIR3DL3Q8N743 410 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 TM4SF5O14894 197 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-221ENST00000640341 FCN3O75636 299 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 C3orf79P0CE67 100 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 Q0VG73 95 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 Q6ZN92 141 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 TEX43Q6ZNM6 134 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 FAM169BQ8N8A8 192 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 IGFBPL1Q8WX77 278 aa11.79□□□□□ -0.52
SCARB2-221ENST00000640341 C16orf97H3BN30 126 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 MT-ND6P03923 174 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 BPIFB3P59826 476 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 PDPNQ86YL7 162 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 LY96Q9Y6Y9 160 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 TRAV9-1A0A075B6T8 112 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 LRRC10Q5BKY1 277 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 NUP35Q8NFH5 326 aa11.78□□□□□ -0.52
SCARB2-221ENST00000640341 A0A1W2PPI3 338 aa11.77□□□□□ -0.52
SCARB2-221ENST00000640341 COX7A1P24310 79 aa11.77□□□□□ -0.52
SCARB2-221ENST00000640341 COMPP49747 757 aaPredicted RBP11.77□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.52
SCARB2-221ENST00000640341 PIP4P1Q86T03 277 aa11.77□□□□□ -0.52
SCARB2-221ENST00000640341 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.52
SCARB2-221ENST00000640341 NPSP0C0P6 89 aa11.77□□□□□ -0.53
SCARB2-221ENST00000640341 FAM87AP0C7U9 286 aa11.77□□□□□ -0.53
SCARB2-221ENST00000640341 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.533e-7■■■□□ 19
SCARB2-221ENST00000640341 TSKUQ8WUA8 353 aa11.77□□□□□ -0.53
SCARB2-221ENST00000640341 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
SCARB2-221ENST00000640341 TRBV9A0A0B4J1U6 114 aa11.77□□□□□ -0.53
SCARB2-221ENST00000640341 SH2D7A6NKC9 451 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-221ENST00000640341 M0R2Z0 102 aa11.77□□□□□ -0.53
SCARB2-221ENST00000640341 ZNF329Q86UD4 541 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms