RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 DTD1Q8TEA8 209 aa13.06□□□□□ -0.32
PNKP-230ENST00000638016 ACY3Q96HD9 319 aa13.06□□□□□ -0.32
PNKP-230ENST00000638016 ALMS1Q8TCU4 4167 aa13.06□□□□□ -0.32
PNKP-230ENST00000638016 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 SPRY2O43597 315 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 IFNA10P01566 189 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 NPPCP23582 126 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 VAMP1P23763 118 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 OR10J1P30954 320 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 AP3S2P59780 193 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 DEFB131AP59861 70 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 BAK1Q16611 211 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 RNASEH2CQ8TDP1 164 aaKnown RBP13.05□□□□□ -0.32
PNKP-230ENST00000638016 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 METTL26Q96S19 204 aa13.05□□□□□ -0.32
PNKP-230ENST00000638016 IAPPP10997 89 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 ANXA3P12429 323 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 CRYBB3P26998 211 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 P2RY1P47900 373 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 PPP1R1AQ13522 171 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 USF2Q15853 346 aaPredicted RBP13.04□□□□□ -0.32
PNKP-230ENST00000638016 TMEM128Q5BJH2 165 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 Q6ZWC4 215 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 LYG2Q86SG7 212 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 STPG3Q8N7X2 389 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 OR1S2Q8NGQ3 325 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 RABAC1Q9UI14 185 aa13.04□□□□□ -0.32
PNKP-230ENST00000638016 KIR2DL5BA0A0G2JN68 375 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 KIR2DL5BA0A0G2JPC4 375 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 DNASE2O00115 360 aaPredicted RBP13.03□□□□□ -0.32
PNKP-230ENST00000638016 BMI1P35226 326 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 KIR2DL5AQ8N109 375 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 KIR2DL5BQ8NHK3 375 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 RNF183Q96D59 192 aa13.03□□□□□ -0.32
PNKP-230ENST00000638016 SDHCQ99643 169 aaPredicted RBP13.03□□□□□ -0.32
PNKP-230ENST00000638016 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 PITX3O75364 302 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 SFT2D2O95562 160 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 SLC25A4P12235 298 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 PAFAH1B2P68402 229 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 SRPXP78539 464 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 IL17DQ8TAD2 202 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 U3KQE9 123 aa13.02□□□□□ -0.33
PNKP-230ENST00000638016 ZNF701M0R085 212 aaPredicted RBP13.01□□□□□ -0.33
PNKP-230ENST00000638016 UBE2CO00762 179 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 IL4P05112 153 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 YPEL3P61236 119 aaPredicted RBP13.01□□□□□ -0.33
PNKP-230ENST00000638016 SPANXN2Q5MJ10 180 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 GSG1LQ6UXU4 331 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 Q8WTZ3 238 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 SLC25A21Q9BQT8 299 aaPredicted RBP13.01□□□□□ -0.33
PNKP-230ENST00000638016 CSTL1Q9H114 145 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 FLVCR2Q9UPI3 526 aa13.01□□□□□ -0.33
PNKP-230ENST00000638016 A0A1W2PS18 150 aa13□□□□□ -0.33
PNKP-230ENST00000638016 K7EQG2 157 aa13□□□□□ -0.33
PNKP-230ENST00000638016 SCGB2A1O75556 95 aa13□□□□□ -0.33
PNKP-230ENST00000638016 IFNA4P05014 189 aa13□□□□□ -0.33
PNKP-230ENST00000638016 HOXB5P09067 269 aa13□□□□□ -0.33
PNKP-230ENST00000638016 ZNF688P0C7X2 276 aa13□□□□□ -0.33
PNKP-230ENST00000638016 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
PNKP-230ENST00000638016 LRTM2Q8N967 370 aa13□□□□□ -0.33
PNKP-230ENST00000638016 GLMPQ8WWB7 406 aa13□□□□□ -0.33
PNKP-230ENST00000638016 MAGT1Q9H0U3 335 aa13□□□□□ -0.33
PNKP-230ENST00000638016 U3KQ87 197 aa13□□□□□ -0.33
PNKP-230ENST00000638016 EPPK1P58107 5090 aaKnown RBP12.99□□□□□ -0.33
PNKP-230ENST00000638016 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 KNCNA6PVL3 124 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 TOMM40O96008 361 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 CD5P06127 495 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
PNKP-230ENST00000638016 PSG1P11464 419 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 ZNF90Q03938 601 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 GAMTQ14353 236 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 ETFRF1Q6IPR1 90 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 C16orf54Q6UWD8 224 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 DCANP1Q8TF63 244 aa12.99□□□□□ -0.33
PNKP-230ENST00000638016 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 DUXBA0A1W2PPF3 345 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 ADAP1O75689 374 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
PNKP-230ENST00000638016 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 BTCP35070 178 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 CMC4P56277 68 aaPredicted RBP12.98□□□□□ -0.33
PNKP-230ENST00000638016 GGNBP1Q5YKI7 109 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 TRIQKQ629K1 86 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
PNKP-230ENST00000638016 PAIP2BQ9ULR5 123 aaKnown RBP12.98□□□□□ -0.33
PNKP-230ENST00000638016 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
PNKP-230ENST00000638016 NDUFB6O95139 128 aa12.97□□□□□ -0.33
PNKP-230ENST00000638016 DHRS2Q13268 280 aa12.97□□□□□ -0.33
PNKP-230ENST00000638016 NARS2Q96I59 477 aaKnown RBP12.97□□□□□ -0.33
PNKP-230ENST00000638016 CACFD1Q9UGQ2 172 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms