RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 MRPL27Q9P0M9 148 aaKnown RBP0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 TMEM14CQ9P0S9 112 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 CACNA1EQ15878 2313 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 CNTRLQ7Z7A1 2325 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 APCP25054 2843 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 MAST2Q6P0Q8 1798 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 NUP155O75694 1391 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 TRBV6-4A0A1B0GX49 114 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 PIRO00625 290 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 OR2J2O76002 312 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 OR4E1P0C645 316 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 SMIM10L2AP0DMW4 78 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 SMIM10L2BP0DMW5 78 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 OR2F1Q13607 317 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 CCDC122Q5T0U0 273 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 LCA10Q71F78 164 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 KRT222Q8N1A0 295 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 LINC00301Q8NCQ3 95 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 OR11H6Q8NGC7 330 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 DCUN1D1Q96GG9 259 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 CCDC90BQ9GZT6 254 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 UTP11Q9Y3A2 253 aaKnown RBP0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 MYO3BQ8WXR4 1341 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 RALGAPA2Q2PPJ7 1873 aa0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 COL1A1P02452 1464 aaPredicted RBP0.1□□□□□ -2.39
SCARNA4-201ENST00000629045 NAV2Q8IVL1 2488 aa0.09□□□□□ -2.39
SCARNA4-201ENST00000629045 CEP192Q8TEP8 1941 aa0.09□□□□□ -2.39
SCARNA4-201ENST00000629045 A0A087X0T9 212 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 TRAV26-2A0A0B4J265 109 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 TLCD2A6NGC4 264 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 CETN3O15182 167 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 RBP1P09455 135 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 CASP1P29466 404 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 SULT1A1P50225 295 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 MAGOHP61326 146 aaKnown RBP0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 CDKL4Q5MAI5 379 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 OR8D4Q8NGM9 314 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 C14orf132Q9NPU4 83 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 VPS29Q9UBQ0 182 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 GUCA1BQ9UMX6 200 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 CYSLTR1Q9Y271 337 aa0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 WRNQ14191 1432 aaPredicted RBP eCLIP0.09□□□□□ -2.4
SCARNA4-201ENST00000629045 NAV3Q8IVL0 2385 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 ASCC3Q8N3C0 2202 aaKnown RBP0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 IGHV1-58A0A0C4DH39 117 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 A0A0D9SG42 100 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 TCRBV4S1A1TA0A5B7 111 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 CHP2O43745 196 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 NUPR1O60356 82 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 DHFRP00374 187 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 IFNA5P01569 189 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 TTRP02766 147 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 ANP32AP39687 249 aaKnown RBP0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 CIRBPQ14011 172 aaKnown RBP0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 TSNQ15631 228 aaKnown RBP0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 SPINK9Q5DT21 86 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 KRTAP26-1Q6PEX3 210 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 ST6GALNAC3Q8NDV1 305 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 PLPP5Q8NEB5 264 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 OR2T35Q8NGX2 323 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 OR2T10Q8NGZ9 312 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 TMEM254Q8TBM7 123 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 WFDC5Q8TCV5 224 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 HIST1H2BLQ99880 126 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 BCL2L10Q9HD36 194 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 C14orf105Q9NVL8 296 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 TAS2R7Q9NYW3 318 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 UBAP1Q9NZ09 502 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 CHCHD2Q9Y6H1 151 aaPredicted RBP0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 DENND4CQ5VZ89 1909 aa0.08□□□□□ -2.4
SCARNA4-201ENST00000629045 FAT4Q6V0I7 4981 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 FAM236DA0A1B0GTK5 79 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 C1orf196B1AJZ1 125 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 M0R036 132 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 AHSA1O95433 338 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 ZNF682O95780 498 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 IGLV3-1P01715 115 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 IFNA16P05015 189 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 FAM236CP0DP71 79 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 NKX2-5P52952 324 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 RHOBP62745 196 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 COTL1Q14019 142 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 LINC00575Q6W349 94 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 DDI1Q8WTU0 396 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 ADAT3Q96EY9 351 aaPredicted RBP0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 C8orf76Q96K31 380 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 C2orf50Q96LR7 162 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 PRRT1Q99946 306 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 PLAC8Q9NZF1 115 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 ORMDL1Q9P0S3 153 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 TNFSF18Q9UNG2 199 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 DOCK3Q8IZD9 2030 aa0.07□□□□□ -2.4
SCARNA4-201ENST00000629045 MAP3K5Q99683 1374 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 SYNE1Q8NF91 8797 aaKnown RBP0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 M0R378 163 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 GADD45GO95257 159 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 KRTAP2-3P0C7H8 128 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 AP3S2P59780 193 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms