RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 RFNGQ9Y644 331 aa12.79□□□□□ -0.36
CCNA1-203ENST00000625767 CLN5O75503 358 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 IGLC1P0CG04 106 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 ZNF90Q03938 601 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 VWC2Q2TAL6 325 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 TIGITQ495A1 244 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 TMEM182Q6ZP80 229 aaPredicted RBP12.78□□□□□ -0.36
CCNA1-203ENST00000625767 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 KCNRGQ8N5I3 272 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 TMEM147Q9BVK8 224 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
CCNA1-203ENST00000625767 GNG7O60262 68 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 IGKV1-17P01599 117 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 GATA2P23769 480 aaPredicted RBP12.77□□□□□ -0.36
CCNA1-203ENST00000625767 OR2F1Q13607 317 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 C12orf54Q6X4T0 127 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 ATP5SQ99766 215 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 GGACTQ9BVM4 153 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 NPVFQ9HCQ7 196 aa12.77□□□□□ -0.36
CCNA1-203ENST00000625767 PEF1Q9UBV8 284 aaKnown RBP12.77□□□□□ -0.36
CCNA1-203ENST00000625767 TGOLN2O43493 480 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 OR10J1P30954 320 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
CCNA1-203ENST00000625767 ARL3P36405 182 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 NPBWR1P48145 328 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 RIPPLY3P57055 190 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 ZNF345Q14585 488 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 RPL7L1Q6DKI1 246 aaKnown RBP12.77□□□□□ -0.37
CCNA1-203ENST00000625767 TMUB2Q71RG4 321 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 TMEM144Q7Z5S9 345 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 THAP8Q8NA92 274 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 OR11H1Q8NG94 326 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 RAX2Q96IS3 184 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 MGST2Q99735 147 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 ZNF747Q9BV97 191 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 ARL6Q9H0F7 186 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
CCNA1-203ENST00000625767 LSM4Q9Y4Z0 139 aaKnown RBP12.77□□□□□ -0.37
CCNA1-203ENST00000625767 IGHV3OR16-8A0A075B7F1 116 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 ZFP92A6NM28 416 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 OR2C1O95371 312 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 RUNX1Q01196 453 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 WDR83OSQ9Y284 106 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 PKD1L1Q8TDX9 2849 aa12.76□□□□□ -0.37
CCNA1-203ENST00000625767 FNDC10F2Z333 226 aa12.75□□□□□ -0.37
CCNA1-203ENST00000625767 FGF7P21781 194 aa12.75□□□□□ -0.37
CCNA1-203ENST00000625767 SLURP1P55000 103 aa12.75□□□□□ -0.37
CCNA1-203ENST00000625767 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
CCNA1-203ENST00000625767 TXN2Q99757 166 aa12.75□□□□□ -0.37
CCNA1-203ENST00000625767 TEPPQ6URK8 271 aa12.74□□□□□ -0.37
CCNA1-203ENST00000625767 BTNL8Q6UX41 500 aa12.74□□□□□ -0.37
CCNA1-203ENST00000625767 RSG1Q9BU20 258 aa12.74□□□□□ -0.37
CCNA1-203ENST00000625767 WDR61Q9GZS3 305 aaKnown RBP12.74□□□□□ -0.37
CCNA1-203ENST00000625767 A0A0D9SG52 128 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 AGPAT2O15120 278 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 NUPL2O15504 423 aaKnown RBP12.73□□□□□ -0.37
CCNA1-203ENST00000625767 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
CCNA1-203ENST00000625767 HSPB1P04792 205 aaKnown RBP12.73□□□□□ -0.37
CCNA1-203ENST00000625767 HNRNPCP07910 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCNA1-203ENST00000625767 SPATA3Q8NHX4 192 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
CCNA1-203ENST00000625767 DNHD1Q96M86 4753 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 CCL24O00175 119 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 BCL2L11O43521 198 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 DFFBO76075 338 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 EDN2P20800 178 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 HOXD3P31249 432 aaPredicted RBP12.73□□□□□ -0.37
CCNA1-203ENST00000625767 UNQ9165/PRO28630Q6UXU0 137 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 HSD17B11Q8NBQ5 300 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 OR1N2Q8NGR9 330 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 ARPC5LQ9BPX5 153 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 GGTLC1Q9BX51 225 aa12.73□□□□□ -0.37
CCNA1-203ENST00000625767 LINC01619G3V211 115 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 GGCTO75223 188 aaKnown RBP12.72□□□□□ -0.37
CCNA1-203ENST00000625767 PSG1P11464 419 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 CYP2G1PQ6ZSU1 146 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 TRGV9Q99603 122 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 NPCDR1Q9BY65 106 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 SH3BGRL3Q9H299 93 aa12.72□□□□□ -0.37
CCNA1-203ENST00000625767 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCNA1-203ENST00000625767 CAMLGP49069 296 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 FHL3Q13643 280 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 MIC13Q5XKP0 118 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 SPSB3Q6PJ21 355 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 BPIFCQ8NFQ6 507 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 ATP6V0BQ99437 205 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 SLC45A2Q9UMX9 530 aa12.71□□□□□ -0.37
CCNA1-203ENST00000625767 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 KANTRA0A1W2PQU2 76 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
CCNA1-203ENST00000625767 TSPAN15O95858 294 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 IFNA5P01569 189 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 OPCMLQ14982 345 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 FAM209BQ5JX69 171 aa12.7□□□□□ -0.38
CCNA1-203ENST00000625767 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 375.4 ms