RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 PITX3O75364 302 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 S1PR2O95136 353 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 KRASP01116 189 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 IFNA17P01571 189 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 SOD3P08294 240 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 SAA2P0DJI9 122 aaPredicted RBP3.65□□□□□ -1.83
VPS29-212ENST00000621131 PPIAL4GP0DN37 164 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 CGB3P0DN86 165 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 CGB7P0DN87 165 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 IGHV1-8P0DP01 117 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 COL8A2P25067 703 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 MC5RP33032 325 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 G6PCP35575 357 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 SULT1A1P50225 295 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 RAB5CP51148 216 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 POLR2GP62487 172 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS29-212ENST00000621131 EWSR1Q01844 656 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS29-212ENST00000621131 IL15RAQ13261 267 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 ZNF273Q14593 569 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 VMA21Q3ZAQ7 101 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 RPL39P5Q59GN2 51 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 AVPI1Q5T686 147 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 C9orf66Q5T8R8 295 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 DUX4L9Q6RFH8 374 aaPredicted RBP3.65□□□□□ -1.83
VPS29-212ENST00000621131 ALKAL2Q6UX46 152 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 LYPD2Q6UXB3 125 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 C5orf24Q7Z6I8 188 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 COMMD7Q86VX2 200 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 PDPNQ86YL7 162 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 LINC00311Q8N616 119 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 KIR3DL3Q8N743 410 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 ZNF439Q8NDP4 499 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 VSTM2AQ8TAG5 236 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 ZNF596Q8TC21 504 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 SCGB1C1Q8TD33 95 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 GNPNAT1Q96EK6 184 aaPredicted RBP3.65□□□□□ -1.83
VPS29-212ENST00000621131 FAM210AQ96ND0 272 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 RNF126Q9BV68 326 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 PARP12Q9H0J9 701 aaKnown RBP3.65□□□□□ -1.83
VPS29-212ENST00000621131 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 TMEM133Q9H2Q1 129 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 PATZ1Q9HBE1 687 aaKnown RBP3.65□□□□□ -1.83
VPS29-212ENST00000621131 SLC35D1Q9NTN3 355 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 DCAF16Q9NXF7 216 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 FKBP11Q9NYL4 201 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 PRNDQ9UKY0 176 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 STRAPQ9Y3F4 350 aaKnown RBP3.65□□□□□ -1.83
VPS29-212ENST00000621131 WSB1Q9Y6I7 421 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 ABCA4P78363 2273 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 A0A1W2PPE3 182 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 LINC00862A6NCI5 91 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 FAM24AA6NFZ4 105 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 C17orf98A8MV24 154 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 C17orf112F2Z3M2 114 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 NDUFS8O00217 210 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 CHST1O43916 411 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 CRYZL1O95825 349 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 IGKV1-5P01602 117 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 IGHV3-7P01780 117 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 OR8U8P0C7N1 319 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 IAPPP10997 89 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 CCL3L1P16619 93 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 GPR183P32249 361 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 SPCS3P61009 180 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 UBE2KP61086 200 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 RAB11AP62491 216 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 RPL30P62888 115 aaKnown RBP3.64□□□□□ -1.83
VPS29-212ENST00000621131 DLK1P80370 383 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 TNFRSF9Q07011 255 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 EIF4EBP1Q13541 118 aaPredicted RBP3.64□□□□□ -1.83
VPS29-212ENST00000621131 ATP6V1FQ16864 119 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 CT45A1Q5HYN5 189 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 SPANXN5Q5MJ07 72 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 WDR25Q64LD2 544 aaPredicted RBP3.64□□□□□ -1.83
VPS29-212ENST00000621131 NCR3LG1Q68D85 454 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 CLEC2AQ6UVW9 174 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
VPS29-212ENST00000621131 TCF23Q7RTU1 214 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 TGIF2LYQ8IUE0 185 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 TGIF2LXQ8IUE1 241 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 UBAC2Q8NBM4 344 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 OR52E5Q8NH55 327 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 OR4A5Q8NH83 315 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 CT45A3Q8NHU0 189 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 C8orf46Q8TAG6 207 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 DTD1Q8TEA8 209 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 LEAP2Q969E1 77 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 RPEQ96AT9 228 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 PINX1Q96BK5 328 aaKnown RBP3.64□□□□□ -1.83
VPS29-212ENST00000621131 FLYWCH2Q96CP2 140 aaKnown RBP3.64□□□□□ -1.83
VPS29-212ENST00000621131 SMIM8Q96KF7 97 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 ATP5SQ99766 215 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 AGMATQ9BSE5 352 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 SMIM3Q9BZL3 60 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 RBKSQ9H477 322 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 KCNIP2Q9NS61 270 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 MED9Q9NWA0 146 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 WASHC3Q9Y3C0 194 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 ZANQ9Y493 2812 aa3.64□□□□□ -1.83
VPS29-212ENST00000621131 IGHV2-26A0A0B4J1V2 119 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms