RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ODF3BA8MYP8 253 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 TIMM23O14925 209 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 TYMSP04818 313 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 STAG3L2P0CL84 134 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 STAG3L3P0CL85 134 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 APELAP0DMC3 54 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 PAX2Q02962 417 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 TPTE2P1Q5T6R2 138 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 TMEM37Q8WXS4 190 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 TXNDC17Q9BRA2 123 aa13.99□□□□□ -0.17
CNOT3-209ENST00000617930 M0R1W7 72 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 FOXH1O75593 365 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 COX6B1P14854 86 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 AREGP15514 252 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 PRTN3P24158 256 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 CD24P25063 80 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 LGALS4P56470 323 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 LCN2P80188 198 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 ERHP84090 104 aaKnown RBP13.98□□□□□ -0.17
CNOT3-209ENST00000617930 COA6Q5JTJ3 125 aaKnown RBP13.98□□□□□ -0.17
CNOT3-209ENST00000617930 DYNAPQ8N1N2 210 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 CFHR4Q92496 578 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 BTF3L4Q96K17 158 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 HILPDAQ9Y5L2 63 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 ZFHX3Q15911 3703 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 ATP5IP56385 69 aaPredicted RBP13.98□□□□□ -0.17
CNOT3-209ENST00000617930 JOSD1Q15040 202 aaPredicted RBP13.98□□□□□ -0.17
CNOT3-209ENST00000617930 HIST2H2BCQ6DN03 193 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 RNASEH2CQ8TDP1 164 aaKnown RBP13.98□□□□□ -0.17
CNOT3-209ENST00000617930 PRO1933Q9H354 126 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 FBXL15Q9H469 300 aa13.98□□□□□ -0.17
CNOT3-209ENST00000617930 MAP1AP78559 2803 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-209ENST00000617930 A0A1W2PN81 502 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 ABCA12Q86UK0 2595 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 A0A0U1RQK1 487 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 ZNF320A2RRD8 509 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 PGPEP1LA6NFU8 196 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 HTR1DP28221 377 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 OR10J1P30954 320 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 LMO4P61968 165 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 TNXAQ16473 311 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
CNOT3-209ENST00000617930 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-209ENST00000617930 SCO2A0A1W2PP80 73 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 TEX22C9J3V5 150 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 GPX4P36969 197 aaPredicted RBP13.96□□□□□ -0.17
CNOT3-209ENST00000617930 PDLIM4P50479 330 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 RAB31Q13636 194 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 PVRIGQ6DKI7 326 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 VMO1Q7Z5L0 202 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 PPP1R27Q86WC6 154 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 LINC00469Q8N7U9 141 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 SFRP2Q96HF1 295 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 IMMP2LQ96T52 175 aa13.96□□□□□ -0.17
CNOT3-209ENST00000617930 IGKV1D-37A0A075B6S9 117 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 MT-CO2P00403 227 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 DDTP30046 118 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 COMPP49747 757 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-209ENST00000617930 CNN1P51911 297 aaKnown RBP13.95□□□□□ -0.18
CNOT3-209ENST00000617930 RHOBP62745 196 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 MMD2Q8IY49 270 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 TMEM18Q96B42 140 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 TRAPPC1Q9Y5R8 145 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 HNF1AP20823 631 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 MIR17HGQ75NE6 70 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 CACNG8Q8WXS5 425 aa13.95□□□□□ -0.18
CNOT3-209ENST00000617930 WNK2Q9Y3S1 2297 aa13.94□□□□□ -0.18
CNOT3-209ENST00000617930 J3QKU1 62 aa13.94□□□□□ -0.18
CNOT3-209ENST00000617930 ACTL6BO94805 426 aa13.94□□□□□ -0.18
CNOT3-209ENST00000617930 GZMBP10144 247 aa13.94□□□□□ -0.18
CNOT3-209ENST00000617930 GCHFRP30047 84 aa13.94□□□□□ -0.18
CNOT3-209ENST00000617930 RPL27AP46776 148 aaKnown RBP13.94□□□□□ -0.18
CNOT3-209ENST00000617930 SIRPDQ9H106 197 aa13.94□□□□□ -0.18
CNOT3-209ENST00000617930 PSMB11A5LHX3 300 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 GCGP01275 180 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
CNOT3-209ENST00000617930 C1orf122Q6ZSJ8 110 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 NPIPB3Q92617 1050 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 ZNF503Q96F45 646 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 PERPQ96FX8 193 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 C14orf144Q96I85 54 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 YTHDF2Q9Y5A9 579 aaKnown RBP13.93□□□□□ -0.18
CNOT3-209ENST00000617930 ZNF705GA8MUZ8 300 aaPredicted RBP13.93□□□□□ -0.18
CNOT3-209ENST00000617930 RPL15P61313 204 aaKnown RBP13.93□□□□□ -0.18
CNOT3-209ENST00000617930 ZNF90Q03938 601 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 MORN5Q5VZ52 161 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 SGMS2Q8NHU3 365 aa13.93□□□□□ -0.18
CNOT3-209ENST00000617930 APCP25054 2843 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 TRBV20OR9-2A0A075B6H5 130 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 IGHV4-30-2A0A087WSY4 118 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 VWC2LB2RUY7 222 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 ATP5J2P56134 94 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 FOXL1Q12952 345 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 SSX2Q16385 188 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 REC114Q7Z4M0 266 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 MRPL41Q8IXM3 137 aaKnown RBP13.92□□□□□ -0.18
CNOT3-209ENST00000617930 OR10G8Q8NGN5 311 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 C10orf105Q8TEF2 133 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms