RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 COX19Q49B96 90 aa13.85□□□□□ -0.19
NEK3-206ENST00000611833 ZNF329Q86UD4 541 aa13.85□□□□□ -0.19
NEK3-206ENST00000611833 SAMD10Q9BYL1 202 aa13.85□□□□□ -0.19
NEK3-206ENST00000611833 TNFRSF19Q9NS68 423 aa13.85□□□□□ -0.19
NEK3-206ENST00000611833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.84□□□□□ -0.19
NEK3-206ENST00000611833 MOSP00540 346 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 ESDP10768 282 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 DLX1P56177 255 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 USF2Q15853 346 aaPredicted RBP13.84□□□□□ -0.19
NEK3-206ENST00000611833 MRGPRG-AS1Q2M3A8 158 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 MRPL54Q6P161 138 aaKnown RBP13.84□□□□□ -0.19
NEK3-206ENST00000611833 TEX45Q8NA69 505 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 BEND2Q8NDZ0 799 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 POLEQ07864 2286 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 A0A1B0GV90 55 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 SMIM27A0A1W2PRY6 76 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 IGLC7A0M8Q6 106 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 B9A039 149 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 F2Z2F3 143 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 PEX7O00628 323 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 CD3EP07766 207 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 APELAP0DMC3 54 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 CD33P20138 364 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 PRRX1P54821 245 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 TMEM136Q6ZRR5 245 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 OR1B1Q8NGR6 318 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 C22orf15Q8WYQ4 148 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 FXYD5Q96DB9 178 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 TBX15Q96SF7 602 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 VKORC1Q9BQB6 163 aa13.84□□□□□ -0.19
NEK3-206ENST00000611833 RALYQ9UKM9 306 aaKnown RBP13.84□□□□□ -0.19
NEK3-206ENST00000611833 POLR3KQ9Y2Y1 108 aaPredicted RBP13.84□□□□□ -0.19
NEK3-206ENST00000611833 IGHV2-26A0A0B4J1V2 119 aa13.83□□□□□ -0.2
NEK3-206ENST00000611833 CA1P00915 261 aaPredicted RBP13.83□□□□□ -0.2
NEK3-206ENST00000611833 AMY1AP04745 511 aa13.83□□□□□ -0.2
NEK3-206ENST00000611833 RPL27AP46776 148 aaKnown RBP13.83□□□□□ -0.2
NEK3-206ENST00000611833 PRB3Q04118 309 aaPredicted RBP13.83□□□□□ -0.2
NEK3-206ENST00000611833 Q6ZWC4 215 aa13.83□□□□□ -0.2
NEK3-206ENST00000611833 PERPQ96FX8 193 aa13.83□□□□□ -0.2
NEK3-206ENST00000611833 HSPB9Q9BQS6 159 aa13.83□□□□□ -0.2
NEK3-206ENST00000611833 TRAV34A0A0B4J273 112 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 KIAA1644Q3SXP7 199 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 TNFRSF14Q92956 283 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 GNB4Q9HAV0 340 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 INSIG2Q9Y5U4 225 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 C22orf46C9J442 243 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 LYNX1G3V0Z9 82 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 LYNX1P0DP58 116 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 CNTFRP26992 372 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 C1orf194Q5T5A4 169 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 STXBP6Q8NFX7 210 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 SSBP3Q9BWW4 388 aaPredicted RBP13.82□□□□□ -0.2
NEK3-206ENST00000611833 PLXNB1O43157 2135 aa13.82□□□□□ -0.2
NEK3-206ENST00000611833 IZUMO1RA6ND01 250 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 FSTL3O95633 263 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 LBHQ53QV2 105 aaPredicted RBP13.81□□□□□ -0.2
NEK3-206ENST00000611833 ASPHD1Q5U4P2 390 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 RUSC1-AS1Q66K80 236 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 TOMM20LQ6UXN7 152 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 BLNKQ8WV28 456 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 IGHV3-21A0A0B4J1V1 117 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 HLA-DQA1P01909 254 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 MFAP2P55001 183 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 C19orf35Q6ZS72 473 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 FAM168AQ92567 244 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 ZNF331Q9NQX6 463 aaPredicted RBP13.81□□□□□ -0.2
NEK3-206ENST00000611833 CEP295Q9C0D2 2601 aa13.81□□□□□ -0.2
NEK3-206ENST00000611833 CRYGCP07315 174 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 BRS3P32247 399 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 LHFPL4Q7Z7J7 247 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 SIGLECL1Q8N7X8 197 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 TRGV9Q99603 122 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 SIGLEC9Q9Y336 463 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 IGHV1-3A0A0C4DH29 117 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 SLC25A5P05141 298 aaKnown RBP13.8□□□□□ -0.2
NEK3-206ENST00000611833 CASP6P55212 293 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 UBE2G1P62253 170 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 GNG5P63218 68 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 OR10J3Q5JRS4 329 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 PRR27Q6MZM9 219 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 C2orf88Q9BSF0 95 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
NEK3-206ENST00000611833 IGLV1-47P01700 117 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 COMPP49747 757 aaPredicted RBP13.79□□□□□ -0.2
NEK3-206ENST00000611833 FAM231DQ6ZW35 169 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 FAM103A1Q9BTL3 118 aaKnown RBP13.79□□□□□ -0.2
NEK3-206ENST00000611833 TLN1Q9Y490 2541 aaKnown RBP13.79□□□□□ -0.2
NEK3-206ENST00000611833 PGPA6NDG6 321 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 BUB1B-PAK6H3BSN5 160 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 ZNF253O75346 499 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 APCSP02743 223 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 CRYGBP07316 175 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 COX7A1P24310 79 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 GRNP28799 593 aaKnown RBP13.79□□□□□ -0.2
NEK3-206ENST00000611833 SRIP30626 198 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 ZNF841Q6ZN19 808 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 NUDT10Q8NFP7 164 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms