RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 SCARB1Q8WTV0 552 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 MISP3Q96FF7 219 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 ATP6V0BQ99437 205 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 FNDC4Q9H6D8 234 aaPredicted RBP10.06□□□□□ -0.8
CTSA-213ENST00000606782 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
CTSA-213ENST00000606782 DYNC2H1Q8NCM8 4307 aaKnown RBP10.06□□□□□ -0.8
CTSA-213ENST00000606782 MFSD2BA6NFX1 497 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 A8MWP6 167 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 MPC2O95563 127 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 MT-CO2P00403 227 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 GIPP09681 153 aaPredicted RBP10.05□□□□□ -0.8
CTSA-213ENST00000606782 PVALBP20472 110 aaPredicted RBP10.05□□□□□ -0.8
CTSA-213ENST00000606782 GPX4P36969 197 aaPredicted RBP10.05□□□□□ -0.8
CTSA-213ENST00000606782 RAB11AP62491 216 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 TXN2Q99757 166 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
CTSA-213ENST00000606782 CSMD3Q7Z407 3707 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 IGHV3-21A0A0B4J1V1 117 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 PRSS46E5RG02 174 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 E5RGE8 158 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 F8W735 103 aaPredicted RBP10.04□□□□□ -0.8
CTSA-213ENST00000606782 L7N2F9 121 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 IFNA4P05014 189 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 CLEC3BP05452 202 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 CBLN1P23435 193 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 ARL3P36405 182 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 S100A10P60903 97 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 VAMP2P63027 116 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 FAM106AQ4KMX7 169 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 CLEC19AQ6UXS0 136 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 CACNG8Q8WXS5 425 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
CTSA-213ENST00000606782 NEURL2Q9BR09 285 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 C21orf62Q9NYP8 219 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 OR5AC2Q9NZP5 309 aa10.04□□□□□ -0.8
CTSA-213ENST00000606782 TRAV14DV4A0A0A6YYC5 116 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 FAM24AA6NFZ4 105 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 IGHV3-23P01764 117 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 C8orf88P0DMB2 117 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 EDN2P20800 178 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 MFAP4P55083 255 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 RAP2BP61225 183 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 LRRC37A5PQ49AS3 106 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 Q5BKY6 102 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 ETFRF1Q6IPR1 90 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 PRSS54Q6PEW0 395 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 OR4X1Q8NH49 305 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 LYRM2Q9NU23 88 aaPredicted RBP10.03□□□□□ -0.8
CTSA-213ENST00000606782 S4R3C0 116 aa10.03□□□□□ -0.8
CTSA-213ENST00000606782 RPS10-NUDT3A0A1W2PQS6 291 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 H3BP45 60 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 IGHV3-48P01763 117 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 CD7P09564 240 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 SLC25A4P12235 298 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 OPRK1P41145 380 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 P2RY1P47900 373 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 CD81P60033 236 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 FGL1Q08830 312 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 ARL16Q0P5N6 197 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 TMEM252Q8N6L7 170 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
CTSA-213ENST00000606782 GAR1Q9NY12 217 aaKnown RBP10.02□□□□□ -0.81
CTSA-213ENST00000606782 MRPL36Q9P0J6 103 aaKnown RBP10.02□□□□□ -0.81
CTSA-213ENST00000606782 A0A1B0GVG6 124 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 RBMY1BA6NDE4 496 aaKnown RBP10.01□□□□□ -0.81
CTSA-213ENST00000606782 RBMY1EA6NEQ0 496 aaKnown RBP10.01□□□□□ -0.81
CTSA-213ENST00000606782 CCNKO75909 580 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 CTSGP08311 255 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 RBMY1DP0C7P1 496 aaKnown RBP10.01□□□□□ -0.81
CTSA-213ENST00000606782 METTL15P1P0C7V9 234 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 PET100P0DJ07 73 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 NPBWR1P48145 328 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 BCAP31P51572 246 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 ELLP55199 621 aaPredicted RBP10.01□□□□□ -0.81
CTSA-213ENST00000606782 GAMTQ14353 236 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 MARC2Q969Z3 335 aa10.01□□□□□ -0.81
CTSA-213ENST00000606782 PAIP2BQ9ULR5 123 aaKnown RBP10.01□□□□□ -0.81
CTSA-213ENST00000606782 TRAV25A0A0B4J276 109 aa10□□□□□ -0.81
CTSA-213ENST00000606782 OR2T8A6NH00 312 aa10□□□□□ -0.81
CTSA-213ENST00000606782 OR11H12B2RN74 326 aa10□□□□□ -0.81
CTSA-213ENST00000606782 FNDC10F2Z333 226 aa10□□□□□ -0.81
CTSA-213ENST00000606782 G3V3Q6 166 aa10□□□□□ -0.81
CTSA-213ENST00000606782 TGOLN2O43493 480 aa10□□□□□ -0.81
CTSA-213ENST00000606782 CLN5O75503 358 aa10□□□□□ -0.81
CTSA-213ENST00000606782 SULT1A1P50225 295 aa10□□□□□ -0.81
CTSA-213ENST00000606782 CAV2P51636 162 aa10□□□□□ -0.81
CTSA-213ENST00000606782 SPSB3Q6PJ21 355 aa10□□□□□ -0.81
CTSA-213ENST00000606782 UNQ9165/PRO28630Q6UXU0 137 aa10□□□□□ -0.81
CTSA-213ENST00000606782 SLC16A13Q7RTY0 426 aa10□□□□□ -0.81
CTSA-213ENST00000606782 TMEM61Q8N0U2 210 aa10□□□□□ -0.81
CTSA-213ENST00000606782 DEFB125Q8N687 156 aa10□□□□□ -0.81
CTSA-213ENST00000606782 OR10P1Q8NGE3 313 aa10□□□□□ -0.81
CTSA-213ENST00000606782 THAP6Q8TBB0 222 aa10□□□□□ -0.81
CTSA-213ENST00000606782 BSCL2Q96G97 398 aaPredicted RBP10□□□□□ -0.81
CTSA-213ENST00000606782 GGACTQ9BVM4 153 aa10□□□□□ -0.81
CTSA-213ENST00000606782 MBD2Q9UBB5 411 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms