RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 NOXA1Q86UR1 476 aa13.39□□□□□ -0.27
CCDC12-208ENST00000603885 LGI3Q8N145 548 aa13.39□□□□□ -0.27
CCDC12-208ENST00000603885 LILRB2Q8N423 598 aa13.39□□□□□ -0.27
CCDC12-208ENST00000603885 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
CCDC12-208ENST00000603885 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
CCDC12-208ENST00000603885 V9GYH0 126 aa13.39□□□□□ -0.27
CCDC12-208ENST00000603885 PIGBOS1A0A0B4J2F0 54 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 RND2P52198 227 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 TNFRSF9Q07011 255 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 SMCO1Q147U7 214 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 ZNF124Q15973 351 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 ETFRF1Q6IPR1 90 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 PRSS54Q6PEW0 395 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 OR1S2Q8NGQ3 325 aa13.38□□□□□ -0.27
CCDC12-208ENST00000603885 TRAV2A0A0B4J234 112 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 IGLC1P0CG04 106 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 CRYBB3P26998 211 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 TMED4Q7Z7H5 227 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 RNF183Q96D59 192 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 HSPB7Q9UBY9 170 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 DNAH1Q9P2D7 4330 aa13.37□□□□□ -0.27
CCDC12-208ENST00000603885 A0A0J9YWU9 116 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 IFNA10P01566 189 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 OR10J1P30954 320 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 ZNF79Q15937 498 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 LYG2Q86SG7 212 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 DTD1Q8TEA8 209 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 Q8WTZ3 238 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 DEDD2Q8WXF8 326 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 RBM38Q9H0Z9 239 aaKnown RBP13.36□□□□□ -0.27
CCDC12-208ENST00000603885 CSTL1Q9H114 145 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 RABAC1Q9UI14 185 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 U3KQ87 197 aa13.36□□□□□ -0.27
CCDC12-208ENST00000603885 DUXBA0A1W2PPF3 345 aa13.35□□□□□ -0.27
CCDC12-208ENST00000603885 JTBO76095 146 aa13.35□□□□□ -0.27
CCDC12-208ENST00000603885 P2RY1P47900 373 aa13.35□□□□□ -0.27
CCDC12-208ENST00000603885 YPEL3P61236 119 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-208ENST00000603885 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
CCDC12-208ENST00000603885 OR1S1Q8NH92 325 aa13.35□□□□□ -0.27
CCDC12-208ENST00000603885 SLC25A21Q9BQT8 299 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-208ENST00000603885 RBKSQ9H477 322 aa13.35□□□□□ -0.27
CCDC12-208ENST00000603885 MPTX1A8MV57 137 aa13.34□□□□□ -0.27
CCDC12-208ENST00000603885 ZNF701M0R085 212 aaPredicted RBP13.34□□□□□ -0.27
CCDC12-208ENST00000603885 VAMP1P23763 118 aa13.34□□□□□ -0.27
CCDC12-208ENST00000603885 DEFB131AP59861 70 aa13.34□□□□□ -0.27
CCDC12-208ENST00000603885 STXBP6Q8NFX7 210 aa13.34□□□□□ -0.27
CCDC12-208ENST00000603885 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
CCDC12-208ENST00000603885 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
CCDC12-208ENST00000603885 EIF2B2P49770 351 aaKnown RBP13.33□□□□□ -0.28
CCDC12-208ENST00000603885 ATP5IP56385 69 aaPredicted RBP13.33□□□□□ -0.28
CCDC12-208ENST00000603885 RBMS2Q15434 407 aaKnown RBP13.33□□□□□ -0.28
CCDC12-208ENST00000603885 SPANXN2Q5MJ10 180 aa13.33□□□□□ -0.28
CCDC12-208ENST00000603885 ALMS1Q8TCU4 4167 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 CXorf65A6NEN9 183 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 IFNA4P05014 189 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 HNRNPCP07910 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC12-208ENST00000603885 LEMD1Q68G75 181 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 FAM24BQ8N5W8 94 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 TMEM217Q8N7C4 229 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 GATAD1Q8WUU5 269 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 U3KQE9 123 aa13.32□□□□□ -0.28
CCDC12-208ENST00000603885 HELTA6NFD8 242 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 K7EQG2 157 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 TOMM40O96008 361 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 IL4P05112 153 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
CCDC12-208ENST00000603885 PMS2P11Q13670 270 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
CCDC12-208ENST00000603885 PITX3O75364 302 aa13.3□□□□□ -0.28
CCDC12-208ENST00000603885 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
CCDC12-208ENST00000603885 SLC25A6P12236 298 aa13.3□□□□□ -0.28
CCDC12-208ENST00000603885 AP2S1P53680 142 aaPredicted RBP13.3□□□□□ -0.28
CCDC12-208ENST00000603885 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.285e-7■■■■□ 25.4
CCDC12-208ENST00000603885 USF2Q15853 346 aaPredicted RBP13.3□□□□□ -0.28
CCDC12-208ENST00000603885 STHQ8IWL8 128 aa13.3□□□□□ -0.28
CCDC12-208ENST00000603885 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
CCDC12-208ENST00000603885 SRRQ9GZT4 340 aa13.3□□□□□ -0.28
CCDC12-208ENST00000603885 PLECQ15149 4684 aaKnown RBP13.29□□□□□ -0.28
CCDC12-208ENST00000603885 FAM90A26D6RGX4 464 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 SFT2D2O95562 160 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 ZNF688P0C7X2 276 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 GPX4P36969 197 aaPredicted RBP13.29□□□□□ -0.28
CCDC12-208ENST00000603885 INPP1P49441 399 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 PPP1R1AQ13522 171 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 C16orf54Q6UWD8 224 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 GLMPQ8WWB7 406 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 SLC35E1Q96K37 410 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 RARRES2Q99969 163 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 TMED3Q9Y3Q3 217 aa13.29□□□□□ -0.28
CCDC12-208ENST00000603885 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
CCDC12-208ENST00000603885 MED6O75586 246 aa13.28□□□□□ -0.28
CCDC12-208ENST00000603885 PSG1P11464 419 aa13.28□□□□□ -0.28
CCDC12-208ENST00000603885 RAB11AP62491 216 aa13.28□□□□□ -0.28
CCDC12-208ENST00000603885 DHRS2Q13268 280 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms