RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 CIB3Q96Q77 187 aaPredicted RBP12.53□□□□□ -0.4
SSBP4-213ENST00000602088 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
SSBP4-213ENST00000602088 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 NUDT15Q9NV35 164 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 TRAV6A0A075B6T7 132 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 IGHV3-49A0A0A0MS15 119 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 OR11H12B2RN74 326 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 OR10J1P30954 320 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 ID3Q02535 119 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 ASAH1Q13510 395 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 OR1S2Q8NGQ3 325 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 ACY3Q96HD9 319 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 RNF2Q99496 336 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 U3KQK5 164 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
SSBP4-213ENST00000602088 IGHV3OR16-13A0A075B7E8 117 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 IGHV3-74A0A0B4J1X5 117 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 FAM240BA0A1B0GVZ2 78 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 WRBO00258 174 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 UPK1BO75841 260 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 H2AFB2P0C5Z0 115 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-213ENST00000602088 YPEL3P61236 119 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-213ENST00000602088 RAB11AP62491 216 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 LINC00322Q6ZN03 302 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-213ENST00000602088 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 VSIRQ9H7M9 311 aa12.51□□□□□ -0.41
SSBP4-213ENST00000602088 APOHP02749 345 aaPredicted RBP12.5□□□□□ -0.41
SSBP4-213ENST00000602088 IFITM3Q01628 133 aa12.5□□□□□ -0.41
SSBP4-213ENST00000602088 GAMTQ14353 236 aa12.5□□□□□ -0.41
SSBP4-213ENST00000602088 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
SSBP4-213ENST00000602088 Q8WTZ3 238 aa12.5□□□□□ -0.41
SSBP4-213ENST00000602088 ST8SIA2Q92186 375 aa12.5□□□□□ -0.41
SSBP4-213ENST00000602088 NPPCP23582 126 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 BMI1P35226 326 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
SSBP4-213ENST00000602088 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSBP4-213ENST00000602088 RPP30P78346 268 aaKnown RBP12.49□□□□□ -0.41
SSBP4-213ENST00000602088 HAGHQ16775 308 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 ZNF431Q8TF32 576 aaPredicted RBP12.49□□□□□ -0.41
SSBP4-213ENST00000602088 SEC22CQ9BRL7 303 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
SSBP4-213ENST00000602088 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
SSBP4-213ENST00000602088 CD5P06127 495 aa12.48□□□□□ -0.41
SSBP4-213ENST00000602088 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 CRYBB3P26998 211 aa12.48□□□□□ -0.41
SSBP4-213ENST00000602088 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 ZBTB8BQ8NAP8 495 aaPredicted RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
SSBP4-213ENST00000602088 METTL26Q96S19 204 aa12.48□□□□□ -0.41
SSBP4-213ENST00000602088 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
SSBP4-213ENST00000602088 PAIP2BQ9ULR5 123 aaKnown RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
SSBP4-213ENST00000602088 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 A0A1W2PS18 150 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 PRSS46E5RG02 174 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 TOMM40O96008 361 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 RCHY1Q96PM5 261 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
SSBP4-213ENST00000602088 STRAPQ9Y3F4 350 aaKnown RBP12.47□□□□□ -0.41
SSBP4-213ENST00000602088 H3BP45 60 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 DFFBO76075 338 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 PSG1P11464 419 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 PAX9P55771 341 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 C12orf45Q8N5I9 185 aaPredicted RBP12.46□□□□□ -0.41
SSBP4-213ENST00000602088 SMIM8Q96KF7 97 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 WWC2-AS2Q96NR7 200 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 CITED4Q96RK1 184 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 FAM110AQ9BQ89 295 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 PSENENQ9NZ42 101 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 UBQLN2Q9UHD9 624 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 U3KQE9 123 aa12.46□□□□□ -0.41
SSBP4-213ENST00000602088 IGKV3-7A0A075B6H7 116 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 ZFP92A6NM28 416 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 CCSO14618 274 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 SSSCA1O60232 199 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 IL4P05112 153 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
SSBP4-213ENST00000602088 ENKURQ8TC29 256 aa12.45□□□□□ -0.42
SSBP4-213ENST00000602088 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
SSBP4-213ENST00000602088 SCGB1D2O95969 90 aa12.44□□□□□ -0.42
SSBP4-213ENST00000602088 IL5P05113 134 aa12.44□□□□□ -0.42
SSBP4-213ENST00000602088 HNRNPCP07910 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSBP4-213ENST00000602088 TFPI2P48307 235 aa12.44□□□□□ -0.42
SSBP4-213ENST00000602088 PAFAH1B2P68402 229 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms