RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NPPCP23582 126 aa16.81■□□□□ 0.28
CCDC9-204ENST00000599398 OR10J1P30954 320 aa16.81■□□□□ 0.28
CCDC9-204ENST00000599398 OR1S2Q8NGQ3 325 aa16.81■□□□□ 0.28
CCDC9-204ENST00000599398 METTL26Q96S19 204 aa16.81■□□□□ 0.28
CCDC9-204ENST00000599398 SDHCQ99643 169 aaPredicted RBP16.81■□□□□ 0.28
CCDC9-204ENST00000599398 VSIRQ9H7M9 311 aa16.81■□□□□ 0.28
CCDC9-204ENST00000599398 CENPXA8MT69 81 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 IFNA4P05014 189 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 CD5P06127 495 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 RPL11P62913 178 aaKnown RBP16.8■□□□□ 0.28
CCDC9-204ENST00000599398 PAFAH1B2P68402 229 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 FAM90A2PQ658T7 463 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 ACY3Q96HD9 319 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 TMEM231Q9H6L2 316 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 TMED3Q9Y3Q3 217 aa16.8■□□□□ 0.28
CCDC9-204ENST00000599398 DFFBO76075 338 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 NDUFB6O95139 128 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 HOXB5P09067 269 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 IGLC1P0CG04 106 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 UBE2MP61081 183 aaKnown RBP16.79■□□□□ 0.28
CCDC9-204ENST00000599398 CASC10Q5T4H9 136 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 WFDC3Q8IUB2 231 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 LILRB2Q8N423 598 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 NPIPB3Q92617 1050 aa16.79■□□□□ 0.28
CCDC9-204ENST00000599398 A0A1W2PS18 150 aa16.78■□□□□ 0.28
CCDC9-204ENST00000599398 DNASE2O00115 360 aaPredicted RBP16.78■□□□□ 0.28
CCDC9-204ENST00000599398 PITX3O75364 302 aa16.78■□□□□ 0.28
CCDC9-204ENST00000599398 IAPPP10997 89 aa16.78■□□□□ 0.28
CCDC9-204ENST00000599398 IL7P13232 177 aa16.78■□□□□ 0.28
CCDC9-204ENST00000599398 Q8WTZ3 238 aa16.78■□□□□ 0.28
CCDC9-204ENST00000599398 NARS2Q96I59 477 aaKnown RBP16.78■□□□□ 0.28
CCDC9-204ENST00000599398 FLVCR2Q9UPI3 526 aa16.78■□□□□ 0.28
CCDC9-204ENST00000599398 SLC25A6P12236 298 aa16.77■□□□□ 0.28
CCDC9-204ENST00000599398 APOC4P55056 127 aa16.77■□□□□ 0.28
CCDC9-204ENST00000599398 CMC4P56277 68 aaPredicted RBP16.77■□□□□ 0.28
CCDC9-204ENST00000599398 ZFAND6Q6FIF0 208 aa16.77■□□□□ 0.28
CCDC9-204ENST00000599398 APRG1Q8IVJ8 170 aa16.77■□□□□ 0.28
CCDC9-204ENST00000599398 C9orf170A2RU37 121 aa16.76■□□□□ 0.27
CCDC9-204ENST00000599398 RPL35AP18077 110 aaKnown RBP16.76■□□□□ 0.27
CCDC9-204ENST00000599398 CRYBB3P26998 211 aa16.76■□□□□ 0.27
CCDC9-204ENST00000599398 ATP5IP56385 69 aaPredicted RBP16.76■□□□□ 0.27
CCDC9-204ENST00000599398 YPEL3P61236 119 aaPredicted RBP16.76■□□□□ 0.27
CCDC9-204ENST00000599398 GGNBP1Q5YKI7 109 aa16.76■□□□□ 0.27
CCDC9-204ENST00000599398 C7orf50Q9BRJ6 194 aaKnown RBP16.76■□□□□ 0.27
CCDC9-204ENST00000599398 MS4A6AQ9H2W1 248 aa16.76■□□□□ 0.27
CCDC9-204ENST00000599398 PAIP2BQ9ULR5 123 aaKnown RBP16.76■□□□□ 0.27
CCDC9-204ENST00000599398 FAM90A26D6RGX4 464 aa16.75■□□□□ 0.27
CCDC9-204ENST00000599398 MED6O75586 246 aa16.75■□□□□ 0.27
CCDC9-204ENST00000599398 MAGT1Q9H0U3 335 aa16.75■□□□□ 0.27
CCDC9-204ENST00000599398 RABAC1Q9UI14 185 aa16.75■□□□□ 0.27
CCDC9-204ENST00000599398 IL4P05112 153 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 BTCP35070 178 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 P2RY1P47900 373 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 RAB11AP62491 216 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 ZNF124Q15973 351 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 COQ8AQ8NI60 647 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 GRAMD2BQ96HH9 432 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 SLC35E1Q96K37 410 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 MAP6D1Q9H9H5 199 aa16.74■□□□□ 0.27
CCDC9-204ENST00000599398 HNRNPCP07910 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC9-204ENST00000599398 OR4E1P0C645 316 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 RD3LP0DJH9 198 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 ANXA7P20073 488 aaKnown RBP16.73■□□□□ 0.27
CCDC9-204ENST00000599398 DHRS2Q13268 280 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 C4orf46Q504U0 113 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 STPG3Q8N7X2 389 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 STXBP6Q8NFX7 210 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 CIB3Q96Q77 187 aaPredicted RBP16.73■□□□□ 0.27
CCDC9-204ENST00000599398 OVOL2Q9BRP0 275 aa16.73■□□□□ 0.27
CCDC9-204ENST00000599398 WRBO00258 174 aa16.72■□□□□ 0.27
CCDC9-204ENST00000599398 SYNGR2O43760 224 aa16.72■□□□□ 0.27
CCDC9-204ENST00000599398 ADAP1O75689 374 aa16.72■□□□□ 0.27
CCDC9-204ENST00000599398 TOMM40O96008 361 aa16.72■□□□□ 0.27
CCDC9-204ENST00000599398 GPX4P36969 197 aaPredicted RBP16.72■□□□□ 0.27
CCDC9-204ENST00000599398 LYG2Q86SG7 212 aa16.72■□□□□ 0.27
CCDC9-204ENST00000599398 KIR2DL5BA0A0G2JN68 375 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 KIR2DL5BA0A0G2JPC4 375 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 ZFP92A6NM28 416 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 UBE2CO00762 179 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 RPP30P78346 268 aaKnown RBP16.71■□□□□ 0.27
CCDC9-204ENST00000599398 GAMTQ14353 236 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 USF2Q15853 346 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-204ENST00000599398 DEFB135Q30KP9 77 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 KIR2DL5AQ8N109 375 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 KIR2DL5BQ8NHK3 375 aa16.71■□□□□ 0.27
CCDC9-204ENST00000599398 TRAV2A0A0B4J234 112 aa16.7■□□□□ 0.26
CCDC9-204ENST00000599398 IFNA21P01568 189 aa16.7■□□□□ 0.26
CCDC9-204ENST00000599398 PSG1P11464 419 aa16.7■□□□□ 0.26
CCDC9-204ENST00000599398 EIF2B2P49770 351 aaKnown RBP16.7■□□□□ 0.26
CCDC9-204ENST00000599398 DEFB131AP59861 70 aa16.7■□□□□ 0.26
CCDC9-204ENST00000599398 Q6ZWC4 215 aa16.7■□□□□ 0.26
CCDC9-204ENST00000599398 LYRM1O43325 122 aa16.69■□□□□ 0.26
CCDC9-204ENST00000599398 SPRY2O43597 315 aa16.69■□□□□ 0.26
CCDC9-204ENST00000599398 LEMD1Q68G75 181 aa16.69■□□□□ 0.26
CCDC9-204ENST00000599398 FAM24BQ8N5W8 94 aa16.69■□□□□ 0.26
CCDC9-204ENST00000599398 U3KQE9 123 aa16.69■□□□□ 0.26
CCDC9-204ENST00000599398 MPTX1A8MV57 137 aa16.68■□□□□ 0.26
CCDC9-204ENST00000599398 PLA2G10O15496 165 aa16.68■□□□□ 0.26
CCDC9-204ENST00000599398 CNPY1Q3B7I2 92 aa16.68■□□□□ 0.26
CCDC9-204ENST00000599398 SPANXN5Q5MJ07 72 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms