RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 NBEAL2Q6ZNJ1 2754 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 IGKV3-7A0A075B6H7 116 aa16.55■□□□□ 0.24
GTF2F1-204ENST00000594965 LINC00854A0A1B0GVQ3 168 aa16.55■□□□□ 0.24
GTF2F1-204ENST00000594965 SLC25A6P12236 298 aa16.55■□□□□ 0.24
GTF2F1-204ENST00000594965 NOXA1Q86UR1 476 aa16.55■□□□□ 0.24
GTF2F1-204ENST00000594965 OR1S2Q8NGQ3 325 aa16.55■□□□□ 0.24
GTF2F1-204ENST00000594965 TMED3Q9Y3Q3 217 aa16.55■□□□□ 0.24
GTF2F1-204ENST00000594965 DFFBO76075 338 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 IL7P13232 177 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 CRYBB3P26998 211 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 TFPI2P48307 235 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 UBE2MP61081 183 aaKnown RBP16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 ETFRF1Q6IPR1 90 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 GBGT1Q8N5D6 347 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 NPIPB3Q92617 1050 aa16.54■□□□□ 0.24
GTF2F1-204ENST00000594965 C9orf170A2RU37 121 aa16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 SCGB2A1O75556 95 aa16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 HOXB5P09067 269 aa16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 NPPCP23582 126 aa16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 OR10J1P30954 320 aa16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 YPEL3P61236 119 aaPredicted RBP16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 ZNF124Q15973 351 aa16.53■□□□□ 0.24
GTF2F1-204ENST00000594965 CD5P06127 495 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 BMI1P35226 326 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 GGNBP1Q5YKI7 109 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 APRG1Q8IVJ8 170 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 ACY3Q96HD9 319 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 METTL26Q96S19 204 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 C7orf50Q9BRJ6 194 aaKnown RBP16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 OVOL2Q9BRP0 275 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 MS4A6AQ9H2W1 248 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 U3KQE9 123 aa16.52■□□□□ 0.24
GTF2F1-204ENST00000594965 FAM90A26D6RGX4 464 aa16.51■□□□□ 0.23
GTF2F1-204ENST00000594965 PLA2G10O15496 165 aa16.51■□□□□ 0.23
GTF2F1-204ENST00000594965 IAPPP10997 89 aa16.51■□□□□ 0.23
GTF2F1-204ENST00000594965 LYL1P12980 280 aa16.51■□□□□ 0.23
GTF2F1-204ENST00000594965 ATP5IP56385 69 aaPredicted RBP16.51■□□□□ 0.23
GTF2F1-204ENST00000594965 MAP6D1Q9H9H5 199 aa16.51■□□□□ 0.23
GTF2F1-204ENST00000594965 CSMD3Q7Z407 3707 aa16.5■□□□□ 0.23
GTF2F1-204ENST00000594965 WFDC3Q8IUB2 231 aa16.5■□□□□ 0.23
GTF2F1-204ENST00000594965 Q8WTZ3 238 aa16.5■□□□□ 0.23
GTF2F1-204ENST00000594965 TMEM231Q9H6L2 316 aa16.5■□□□□ 0.23
GTF2F1-204ENST00000594965 A0A1W2PS18 150 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 CENPXA8MT69 81 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 ADAP1O75689 374 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 IFNA4P05014 189 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 OR4E1P0C645 316 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 ANXA7P20073 488 aaKnown RBP16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 GPX4P36969 197 aaPredicted RBP16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 P2RY1P47900 373 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 PAFAH1B2P68402 229 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 DHRS2Q13268 280 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 USF2Q15853 346 aaPredicted RBP16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 FAM24BQ8N5W8 94 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 MAGT1Q9H0U3 335 aa16.49■□□□□ 0.23
GTF2F1-204ENST00000594965 IGKV1D-37A0A075B6S9 117 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 TRAV2A0A0B4J234 112 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 MPTX1A8MV57 137 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 TOMM40O96008 361 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 RPL35AP18077 110 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 APOC4P55056 127 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 CMC4P56277 68 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 GAMTQ14353 236 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 ZFAND6Q6FIF0 208 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 LYG2Q86SG7 212 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 STARD9Q9P2P6 4700 aa16.48■□□□□ 0.23
GTF2F1-204ENST00000594965 SYNGR2O43760 224 aa16.47■□□□□ 0.23
GTF2F1-204ENST00000594965 MED6O75586 246 aa16.47■□□□□ 0.23
GTF2F1-204ENST00000594965 HNRNPCP07910 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF2F1-204ENST00000594965 KIR2DL5BA0A0G2JN68 375 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 KIR2DL5BA0A0G2JPC4 375 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 DNASE2O00115 360 aaPredicted RBP16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 IL4P05112 153 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 RD3LP0DJH9 198 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 PSG1P11464 419 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 RPL11P62913 178 aaKnown RBP16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 C16orf54Q6UWD8 224 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 KIR2DL5AQ8N109 375 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 KIR2DL5BQ8NHK3 375 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 GLMPQ8WWB7 406 aa16.46■□□□□ 0.23
GTF2F1-204ENST00000594965 PRSS46E5RG02 174 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 K7EQG2 157 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 WRBO00258 174 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 LYRM1O43325 122 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 ID3Q02535 119 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 Q6ZWC4 215 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 COQ8AQ8NI60 647 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 CIB3Q96Q77 187 aaPredicted RBP16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 AGRNO00468 2067 aa16.45■□□□□ 0.22
GTF2F1-204ENST00000594965 UBE2CO00762 179 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 DEFB131AP59861 70 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 RAB11AP62491 216 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 ZNF90Q03938 601 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 DEFB135Q30KP9 77 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 OR4D5Q8NGN0 318 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 DCANP1Q8TF63 244 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 NARS2Q96I59 477 aaKnown RBP16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 SLC35E1Q96K37 410 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 RABAC1Q9UI14 185 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 TP53TG1Q9Y2A0 90 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms