RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 BUB1B-PAK6H3BSN5 160 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 CYB5BO43169 146 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 CST2P09228 141 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 SMIM17P0DL12 118 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 HOXA6P31267 233 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 RHOBP62745 196 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 Q6Q795 121 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 ZNF826PQ6ZT77 177 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 SLC25A40Q8TBP6 338 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 GPR146Q96CH1 333 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 DGCR14Q96DF8 476 aaKnown RBP0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 STOML2Q9UJZ1 356 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 EPDR1Q9UM22 224 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 ECM29Q5VYK3 1845 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 ADGRL3Q9HAR2 1447 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 HECW2Q9P2P5 1572 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 SULT1B1O43704 296 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 OR2J2O76002 312 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 PROSCO94903 275 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 IFNA7P01567 189 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 BAALC-AS2P0C853 105 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 RNASE3P12724 160 aaKnown RBP0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 DEFB115Q30KQ5 88 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 OR11H6Q8NGC7 330 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 OR10X1Q8NGY0 326 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 HIST1H2BLQ99880 126 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 SLC50A1Q9BRV3 221 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 C9orf16Q9BUW7 83 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 RNASE7Q9H1E1 156 aaKnown RBP0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 RNF122Q9H9V4 155 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 PARVBQ9HBI1 364 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 TAS2R4Q9NYW5 299 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 SLC35A3Q9Y2D2 325 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 SNURFQ9Y675 71 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 INTS1Q8N201 2190 aaKnown RBP0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 FMN1Q68DA7 1419 aa0.97□□□□□ -2.25
PPP4R1-227ENST00000583988 KIF1BO60333 1816 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 SCN10AQ9Y5Y9 1956 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 RP1P56715 2156 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 FAM159BA6NKW6 160 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 TMEM212A6NML5 194 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 C1orf196B1AJZ1 125 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 HMGB3O15347 200 aaKnown RBP0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 OR4E1P0C645 316 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 ASAH2BP0C7U1 165 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 NEFHP12036 1026 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 SPI1P17947 270 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 FKBP2P26885 142 aaKnown RBP0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 SRP14P37108 136 aaKnown RBP0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 CAPZBP47756 277 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 EIF5AP63241 154 aaKnown RBP0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 LINC01554Q52M75 96 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 GOLT1AQ6ZVE7 132 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 LCA10Q71F78 164 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 MED12LQ86YW9 2145 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 C12orf45Q8N5I9 185 aaPredicted RBP0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 PXT1Q8NFP0 134 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 OR8D4Q8NGM9 314 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 OR2T10Q8NGZ9 312 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 OR4C6Q8NH72 309 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 YPEL2Q96QA6 119 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 IMUPQ9GZP8 106 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 TRABDQ9H4I3 376 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 ARMC1Q9NVT9 282 aa0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 BAZ2BQ9UIF8 2168 aaKnown RBP0.96□□□□□ -2.26
PPP4R1-227ENST00000583988 PLXND1Q9Y4D7 1925 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 DOCK3Q8IZD9 2030 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 IGKV1D-42A0A075B6H8 117 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 TRBV19A0A075B6N1 114 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 AIPO00170 330 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 CTSDP07339 412 aaPredicted RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 CRYGAP11844 174 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 BRS3P32247 399 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 PIGPP57054 158 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 HSPE1P61604 102 aaKnown RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 KRR1Q13601 381 aaKnown RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 ZNF846Q147U1 533 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 TAF1AQ15573 450 aaPredicted RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 TSNQ15631 228 aaKnown RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 BCL2L15Q5TBC7 163 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 HACD4Q5VWC8 232 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 Q6ZQT0 140 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 TEX47Q8TBZ9 253 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 PAIP2Q9BPZ3 127 aaKnown RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 CCDC94Q9BW85 323 aaPredicted RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 REG4Q9BYZ8 158 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 PYCARDQ9ULZ3 195 aa0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 PCF11O94913 1555 aaKnown RBP0.95□□□□□ -2.26
PPP4R1-227ENST00000583988 TNRC6BQ9UPQ9 1833 aaKnown RBP0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 CAMSAP1Q5T5Y3 1602 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 HECW1Q76N89 1606 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 TRGV10A0A0A0MS01 117 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 TRAV4A0A0B4J268 109 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 G3V2T6 193 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 ATG12O94817 140 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 UBL3O95164 117 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 NDUFC2O95298 119 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 MGST1P10620 155 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms