RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CKS1BP61024 79 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 ADORA2A-AS1P86434 159 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 HGFACQ04756 655 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 LOXL1Q08397 574 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 FBLN7Q53RD9 439 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 TCTEX1D4Q5JR98 221 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 DMRTA1Q5VZB9 504 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 MRPL54Q6P161 138 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 C8orf82Q6P1X6 216 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 TMEM88Q6PEY1 159 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 LYPD2Q6UXB3 125 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 REC114Q7Z4M0 266 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 TTC9CQ8N5M4 171 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 NRG4Q8WWG1 115 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 FOXC2Q99958 501 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 MRPL13Q9BYD1 178 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 GSX2Q9BZM3 304 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 BET1LQ9NYM9 111 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 NAT8Q9UHE5 227 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 JMJD1CQ15652 2540 aa2.41□□□□□ -2.02
SMCHD1-203ENST00000577880 SORL1Q92673 2214 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 TRBV5-5A0A0J9YX44 114 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 K7EM74 188 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 MLNRO43193 412 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF253O75346 499 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV3-53P01767 116 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV4-39P01824 125 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 GZMBP10144 247 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 RPS11P62280 158 aaKnown RBP eCLIP2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 FAM74A3Q4VXF1 159 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF324BQ6AW86 544 aaPredicted RBP2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 IGFL2Q6UWQ7 119 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 OR52E5Q8NH55 327 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 XCL2Q9UBD3 114 aa2.4□□□□□ -2.02
SMCHD1-203ENST00000577880 LOC102724200A0A096LPH7 203 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 TGIF2-C20orf24A0A0A6YYL0 155 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 LOC389332A0A1B0GUA5 103 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RBMY1BA6NDE4 496 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RBMY1EA6NEQ0 496 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 PRR32B1ATL7 298 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 F8WEM9 126 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 ZNF561-AS1K7EIQ3 104 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 NDUFS7O75251 213 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 FCN3O75636 299 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 ALX3O95076 343 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 DNAL4O96015 105 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 IGHV4-59P01825 116 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RBMY1DP0C7P1 496 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RBMY1A1P0DJD3 496 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RBMY1CP0DJD4 496 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SELLP14151 372 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 HIST1H3AP68431 136 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 INSL4Q14641 139 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 TMEM183BQ1AE95 376 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 FAM71F2Q6NXP2 309 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 TMEM183AQ8IXX5 376 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 TMEM86BQ8N661 226 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 OR1P1Q8NH06 330 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 HIST1H2BAQ96A08 127 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 ANAPC16Q96DE5 110 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 RCC1LQ96I51 464 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 GGACTQ9BVM4 153 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 MRPL27Q9P0M9 148 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 MALRD1Q5VYJ5 2156 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 C17orf98A8MV24 154 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 CTDSPLO15194 276 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 EFNA2O43921 213 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 IGHV2-5P01817 119 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 GRNP28799 593 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 PNRC1Q12796 327 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SLC25A48Q6ZT89 311 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 C1QL4Q86Z23 238 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 OR8A1Q8NGG7 326 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 PLPPR1Q8TBJ4 325 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 GAFA1Q96PS6 74 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 KLK15Q9H2R5 256 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 HSPB8Q9UJY1 196 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SIGLEC9Q9Y336 463 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 LTBP2Q14767 1821 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 ZNF98A6NK75 572 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 C22orf46C9J442 243 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 WISP3O95389 354 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SPART-AS1P0CW21 52 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SS18Q15532 418 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 IBA57Q5T440 356 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 CD200R1LQ6Q8B3 271 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 ZNF562Q6V9R5 426 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 H1FOOQ8IZA3 346 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SELENOHQ8IZQ5 122 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 CYB561D1Q8N8Q1 229 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 WFDC12Q8WWY7 111 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 SMIM8Q96KF7 97 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 EDA2RQ9HAV5 297 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 MRPS18AQ9NVS2 196 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 OR5AC2Q9NZP5 309 aa2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 ANKHD1Q8IWZ3 2542 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-203ENST00000577880 OTOFQ9HC10 1997 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms