RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MGST2Q99735 147 aa18.69■□□□□ 0.58
ATPAF1-213ENST00000574428 PARD6GQ9BYG4 376 aaPredicted RBP18.69■□□□□ 0.58
ATPAF1-213ENST00000574428 PXDC1Q5TGL8 231 aa18.68■□□□□ 0.58
ATPAF1-213ENST00000574428 OR4X1Q8NH49 305 aa18.68■□□□□ 0.58
ATPAF1-213ENST00000574428 MFAP4P55083 255 aa18.68■□□□□ 0.58
ATPAF1-213ENST00000574428 FOXE3Q13461 319 aa18.68■□□□□ 0.58
ATPAF1-213ENST00000574428 NPCDR1Q9BY65 106 aa18.68■□□□□ 0.58
ATPAF1-213ENST00000574428 TMEM89A2RUT3 159 aa18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 F8W735 103 aaPredicted RBP18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 RPLP1P05386 114 aaKnown RBP18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 Q56UQ5 140 aa18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 OR4F5Q8NH21 305 aa18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 ZNF502Q8TBZ5 544 aa18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 EEF1AKMT3Q96AZ1 226 aa18.67■□□□□ 0.58
ATPAF1-213ENST00000574428 IGKV1D-37A0A075B6S9 117 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 ZFP92A6NM28 416 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 BLOC1S1P78537 153 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 TMEM182Q6ZP80 229 aaPredicted RBP18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 Q6ZRG5 221 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 THAP8Q8NA92 274 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 OR5AU1Q8NGC0 362 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 MARC2Q969Z3 335 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 USMG5Q96IX5 58 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 CCDC140Q96MF4 163 aa18.66■□□□□ 0.58
ATPAF1-213ENST00000574428 AGPAT2O15120 278 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 MPDU1O75352 247 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 CLN5O75503 358 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 IGHV3-11P01762 117 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 ELANEP08246 267 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 OR10J1P30954 320 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 NPBWR1P48145 328 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 CAMLGP49069 296 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 OR2T8A6NH00 312 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 GNG7O60262 68 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 OR2G3Q8NGZ4 309 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 GNPNAT1Q96EK6 184 aaPredicted RBP18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 GGTLC1Q9BX51 225 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 HRH4Q9H3N8 390 aa18.65■□□□□ 0.58
ATPAF1-213ENST00000574428 IGLC1P0CG04 106 aa18.64■□□□□ 0.57
ATPAF1-213ENST00000574428 GPR183P32249 361 aa18.64■□□□□ 0.57
ATPAF1-213ENST00000574428 ZNF90Q03938 601 aa18.64■□□□□ 0.57
ATPAF1-213ENST00000574428 RAB31Q13636 194 aa18.64■□□□□ 0.57
ATPAF1-213ENST00000574428 KIAA0141Q14154 515 aaPredicted RBP18.64■□□□□ 0.57
ATPAF1-213ENST00000574428 ZNF709Q8N972 641 aa18.64■□□□□ 0.57
ATPAF1-213ENST00000574428 C2CD3Q4AC94 2353 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 TRBV7-1A0A0A6YYK4 115 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 A0A0G2JLM5 398 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 HAX1O00165 279 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 RAB5CP51148 216 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 TIGITQ495A1 244 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 CLEC19AQ6UXS0 136 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 RNF152Q8N8N0 203 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 WIPF2Q8TF74 440 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 LINC00052Q96N35 136 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 RNF114Q9Y508 228 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 JMJD1CQ15652 2540 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 RAB19A4D1S5 217 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 ZP3P21754 424 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 FHITP49789 147 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 TCTEX1D4Q5JR98 221 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 COMMD1Q8N668 190 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 TXN2Q99757 166 aa18.63■□□□□ 0.57
ATPAF1-213ENST00000574428 TCRBV4S1A1TA0A5B7 111 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 CLPSL1A2RUU4 121 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 NUDT19A8MXV4 375 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 IGKV1-17P01599 117 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 CLEC3BP05452 202 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 GATA2P23769 480 aaPredicted RBP18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 FCGR2BP31994 310 aaPredicted RBP18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 MIC13Q5XKP0 118 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 IL34Q6ZMJ4 242 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 CYP2G1PQ6ZSU1 146 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 MYOZ3Q8TDC0 251 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 OR5B12Q96R08 314 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 TRGV9Q99603 122 aa18.62■□□□□ 0.57
ATPAF1-213ENST00000574428 C17orf112F2Z3M2 114 aa18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 HIST2H2BDQ6DRA6 164 aa18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 ZNF491Q8N8L2 437 aa18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 OR4X2Q8NGF9 303 aa18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 PSMG3Q9BT73 122 aaPredicted RBP18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 SLC45A2Q9UMX9 530 aa18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 TIMM9Q9Y5J7 89 aa18.61■□□□□ 0.57
ATPAF1-213ENST00000574428 ELLP55199 621 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 BPIFCQ8NFQ6 507 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 LYPD6BQ8NI32 183 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 CHRDL1Q9BU40 450 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 PXMP4Q9Y6I8 212 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 SETD2Q9BYW2 2564 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 TRBV12-3P01733 135 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 CTSGP08311 255 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 PROK1P58294 105 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 ZNF616Q08AN1 781 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 UQCC3Q6UW78 93 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 STPG3Q8N7X2 389 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 C11orf44Q8N8P7 122 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 GNB4Q9HAV0 340 aa18.6■□□□□ 0.57
ATPAF1-213ENST00000574428 UMAD1C9J7I0 102 aa18.59■□□□□ 0.57
ATPAF1-213ENST00000574428 KRBOX1C9JBD0 128 aa18.59■□□□□ 0.57
ATPAF1-213ENST00000574428 PPP5D1E7EU14 171 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms