RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 FAM210BQ96KR6 192 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 PFDN5Q99471 154 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 TRGV9Q99603 122 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 CCL19Q99731 98 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 PRELID1Q9Y255 219 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 UTP20O75691 2785 aaKnown RBP15.16■□□□□ 0.02
SMPD3-203ENST00000563226 PFN1P07737 140 aaKnown RBP15.15■□□□□ 0.02
SMPD3-203ENST00000563226 HNF1AP20823 631 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 C22orf15Q8WYQ4 148 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 RNF2Q99496 336 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 ARL2-SNX15V9GYD0 113 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 OOSP1A8MZH6 123 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 ORM2P19652 201 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 BPIFB3P59826 476 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 NDPQ00604 133 aa15.15■□□□□ 0.02
SMPD3-203ENST00000563226 SRSF8Q9BRL6 282 aaKnown RBP15.15■□□□□ 0.02
SMPD3-203ENST00000563226 ZFHX3Q15911 3703 aa15.14■□□□□ 0.01
SMPD3-203ENST00000563226 NCBP2LA6PVI3 153 aaKnown RBP15.14■□□□□ 0.01
SMPD3-203ENST00000563226 UBE2E1P51965 193 aa15.14■□□□□ 0.01
SMPD3-203ENST00000563226 UBE2L3P68036 154 aaKnown RBP15.14■□□□□ 0.01
SMPD3-203ENST00000563226 FAM120AOSQ5T036 256 aa15.14■□□□□ 0.01
SMPD3-203ENST00000563226 LINC00305Q7Z4B0 112 aa15.14■□□□□ 0.01
SMPD3-203ENST00000563226 OR1B1Q8NGR6 318 aa15.14■□□□□ 0.01
SMPD3-203ENST00000563226 CRYBB3P26998 211 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 GALR1P47211 349 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 EBI3Q14213 229 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 CLEC12BQ2HXU8 276 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 KLF17Q5JT82 389 aaPredicted RBP15.13■□□□□ 0.01
SMPD3-203ENST00000563226 ASPHD1Q5U4P2 390 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 TRBV24-1A0A075B6N3 115 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 C5orf52A6NGY3 159 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 K7EIM0 57 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 SNRPCP09234 159 aaKnown RBP15.13■□□□□ 0.01
SMPD3-203ENST00000563226 SAA4P35542 130 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 RPL35P42766 123 aaKnown RBP15.13■□□□□ 0.01
SMPD3-203ENST00000563226 CX3CL1P78423 397 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 OCC1Q8TAD7 63 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 ANAPC16Q96DE5 110 aa15.13■□□□□ 0.01
SMPD3-203ENST00000563226 TBL2Q9Y4P3 447 aaKnown RBP15.13■□□□□ 0.01
SMPD3-203ENST00000563226 IGHV4-61A0A0C4DH41 118 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 TSPAN9O75954 239 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 IGLC1P0CG04 106 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 TMEM11P17152 192 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 PAXXQ9BUH6 204 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 CRYBG3Q68DQ2 2970 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 TRGC2P03986 189 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 S100A6P06703 90 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 AKR1D1P51857 326 aa15.12■□□□□ 0.01
SMPD3-203ENST00000563226 SUMO1P63165 101 aaKnown RBP15.12■□□□□ 0.01
SMPD3-203ENST00000563226 A0A1W2PRE2 83 aa15.11■□□□□ 0.01
SMPD3-203ENST00000563226 K7EN84 100 aa15.11■□□□□ 0.01
SMPD3-203ENST00000563226 FAM168AQ92567 244 aa15.11■□□□□ 0.01
SMPD3-203ENST00000563226 ARPC1AQ92747 370 aa15.11■□□□□ 0.01
SMPD3-203ENST00000563226 OR51M1Q9H341 326 aa15.11■□□□□ 0.01
SMPD3-203ENST00000563226 MYO18BQ8IUG5 2567 aa15.11■□□□□ 0.01
SMPD3-203ENST00000563226 ELOA3CA0A087WX78 387 aaPredicted RBP15.1■□□□□ 0.01
SMPD3-203ENST00000563226 TIGITQ495A1 244 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 ZNF562Q6V9R5 426 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 FXYD5Q96DB9 178 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 OR5B12Q96R08 314 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 GOSR1O95249 250 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 PSG1P11464 419 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 C10orf105Q8TEF2 133 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 SFRP2Q96HF1 295 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 PYGO2Q9BRQ0 406 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 PIMREGQ9BSJ6 248 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 S4R3C0 116 aa15.1■□□□□ 0.01
SMPD3-203ENST00000563226 CELSR1Q9NYQ6 3014 aa15.09■□□□□ 0.01
SMPD3-203ENST00000563226 PERPQ96FX8 193 aa15.09■□□□□ 0.01
SMPD3-203ENST00000563226 CENPVL3A0A0U1RRI6 287 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 C9JCJ5 164 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 UBE2CO00762 179 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 HYPMO75409 117 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 IGKV1-17P01599 117 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 FABP9Q0Z7S8 132 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 LEMD1Q68G75 181 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 Q8N9W7 124 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 RBM14Q96PK6 669 aaKnown RBP15.08■□□□□ 0.01
SMPD3-203ENST00000563226 FANCD2OSQ96PS1 177 aa15.08■□□□□ 0.01
SMPD3-203ENST00000563226 POLR3KQ9Y2Y1 108 aaPredicted RBP15.08■□□□□ 0.01
SMPD3-203ENST00000563226 SPG11Q96JI7 2443 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 ZNF462Q96JM2 2506 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 A0A1W2PPQ1 181 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 NPFFO15130 113 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 CD99P14209 185 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 S100PP25815 95 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 ATP5J2P56134 94 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 PLP1P60201 277 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 CENPWQ5EE01 88 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 TEX38Q6PEX7 206 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 NRGNQ92686 78 aa15.08■□□□□ 0
SMPD3-203ENST00000563226 IGHV3OR16-10A0A075B7F0 116 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 IGHV4-30-2A0A087WSY4 118 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 IGHV7-81A0A0B4J1V7 117 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 MDFIC2A0A1B0GVS7 189 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 HELTA6NFD8 242 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 VWC2LB2RUY7 222 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 PHOX2AO14813 284 aa15.07■□□□□ 0
SMPD3-203ENST00000563226 FAM3BP58499 235 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms