RNA–Protein interactions for RNA: ENST00000562789.5

COMMD4-207, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-207ENST00000562789 ADAP1O75689 374 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 IFNA4P05014 189 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 TIGITQ495A1 244 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 PRSS54Q6PEW0 395 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 SPAG8Q99932 426 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-207ENST00000562789 RHPN1-AS1Q9BWJ2 59 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 ZFAND3Q9H8U3 227 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 SMPXQ9UHP9 88 aa12.1□□□□□ -0.47
COMMD4-207ENST00000562789 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
COMMD4-207ENST00000562789 TRAV30A0A087WSZ9 112 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 CHEK1O14757 476 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 TSPAN4O14817 238 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 MED6O75586 246 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 BMI1P35226 326 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 OR1S2Q8NGQ3 325 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 RNF2Q99496 336 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 MAGT1Q9H0U3 335 aa12.09□□□□□ -0.47
COMMD4-207ENST00000562789 hCG_2014768A0A024R1R8 64 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 TRAV6A0A075B6T7 132 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 IFNA21P01568 189 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 OR10J1P30954 320 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 TBC1D24Q9ULP9 559 aa12.08□□□□□ -0.48
COMMD4-207ENST00000562789 HUWE1Q7Z6Z7 4374 aaKnown RBP12.08□□□□□ -0.48
COMMD4-207ENST00000562789 IGHV3-66A0A0C4DH42 116 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 OR4C46A6NHA9 309 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 WRBO00258 174 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 SYNGR2O43760 224 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 TCRBP04435 133 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 IGLC1P0CG04 106 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 RAB11AP62491 216 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 HAGHQ16775 308 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-207ENST00000562789 METTL26Q96S19 204 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
COMMD4-207ENST00000562789 TFPI2P48307 235 aa12.06□□□□□ -0.48
COMMD4-207ENST00000562789 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-207ENST00000562789 NRARPQ7Z6K4 114 aa12.06□□□□□ -0.48
COMMD4-207ENST00000562789 TMEM231Q9H6L2 316 aa12.06□□□□□ -0.48
COMMD4-207ENST00000562789 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 H3BP45 60 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-207ENST00000562789 NPPCP23582 126 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
COMMD4-207ENST00000562789 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 Q8WTZ3 238 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
COMMD4-207ENST00000562789 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
COMMD4-207ENST00000562789 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 YPEL3P61236 119 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 RPL11P62913 178 aaKnown RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-207ENST00000562789 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
COMMD4-207ENST00000562789 GBGT1Q8N5D6 347 aa12.04□□□□□ -0.48
COMMD4-207ENST00000562789 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
COMMD4-207ENST00000562789 PPP1R14BQ96C90 147 aa12.04□□□□□ -0.48
COMMD4-207ENST00000562789 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
COMMD4-207ENST00000562789 A0A1W2PS18 150 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 SSSCA1O60232 199 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 TOMM40O96008 361 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 IL4P05112 153 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 CD5P06127 495 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 H2AFB2P0C5Z0 115 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 GPX4P36969 197 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-207ENST00000562789 POLR2GP62487 172 aaKnown RBP eCLIP12.03□□□□□ -0.48
COMMD4-207ENST00000562789 PAFAH1B2P68402 229 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 ODF3L2Q3SX64 289 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 OR4D5Q8NGN0 318 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
COMMD4-207ENST00000562789 CCSO14618 274 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 DFFBO76075 338 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 CRYBB3P26998 211 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 BCAP31P51572 246 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 GAMTQ14353 236 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 FAM90A2PQ658T7 463 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-207ENST00000562789 GRAMD2BQ96HH9 432 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 GGTLC1Q9BX51 225 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 RETNQ9HD89 108 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.49
COMMD4-207ENST00000562789 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
COMMD4-207ENST00000562789 LOC102724200A0A096LPH7 203 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-207ENST00000562789 FAM25EA8MYX2 175 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms