RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 MPTX1A8MV57 137 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 DNASE2O00115 360 aaPredicted RBP9.92□□□□□ -0.82
USB1-205ENST00000561743 IGLC1P0CG04 106 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 SLC25A4P12235 298 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 AKR1C4P17516 323 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 ATF4P18848 351 aaPredicted RBP9.92□□□□□ -0.82
USB1-205ENST00000561743 P2RY1P47900 373 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 RND2P52198 227 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 LEMD1Q68G75 181 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
USB1-205ENST00000561743 TRIM63Q969Q1 353 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 SCGB3A2Q96PL1 93 aa9.92□□□□□ -0.82
USB1-205ENST00000561743 A0A0B4J2A0 478 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 A0A1W2PS18 150 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 NPY1RP25929 384 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 DEFB131AP59861 70 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 KLF9Q13886 244 aaPredicted RBP9.91□□□□□ -0.82
USB1-205ENST00000561743 LYZL2Q7Z4W2 148 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 OR1S2Q8NGQ3 325 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 CACFD1Q9UGQ2 172 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 SHPKQ9UHJ6 478 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 RABAC1Q9UI14 185 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 ALMS1Q8TCU4 4167 aa9.91□□□□□ -0.82
USB1-205ENST00000561743 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 K7EQG2 157 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 OR10J1P30954 320 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 CCR6P51684 374 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 YPEL3P61236 119 aaPredicted RBP9.9□□□□□ -0.82
USB1-205ENST00000561743 SMCO1Q147U7 214 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 RBMS2Q15434 407 aaKnown RBP9.9□□□□□ -0.82
USB1-205ENST00000561743 STXBP6Q8NFX7 210 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 GATAD1Q8WUU5 269 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 U3KQE9 123 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 V9GYH0 126 aa9.9□□□□□ -0.82
USB1-205ENST00000561743 FAUP35544 74 aaKnown RBP9.89□□□□□ -0.83
USB1-205ENST00000561743 SRPXP78539 464 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 USF2Q15853 346 aaPredicted RBP9.89□□□□□ -0.83
USB1-205ENST00000561743 ZNF79Q15937 498 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 PYDC2Q56P42 97 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 ETFRF1Q6IPR1 90 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 LGI3Q8N145 548 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 TMEM217Q8N7C4 229 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 DTD1Q8TEA8 209 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 Q8WTZ3 238 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 NPIPB3Q92617 1050 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 NARS2Q96I59 477 aaKnown RBP9.89□□□□□ -0.83
USB1-205ENST00000561743 RARRES2Q99969 163 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 RBKSQ9H477 322 aa9.89□□□□□ -0.83
USB1-205ENST00000561743 CA1P00915 261 aaPredicted RBP9.88□□□□□ -0.83
USB1-205ENST00000561743 IFNA10P01566 189 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 ANXA3P12429 323 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 CEMP1Q6PRD7 247 aaPredicted RBP9.88□□□□□ -0.83
USB1-205ENST00000561743 TMED4Q7Z7H5 227 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 NOXA1Q86UR1 476 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 TOMM5Q8N4H5 51 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 OR11H2Q8NH07 326 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 GLMPQ8WWB7 406 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 LINC00476Q8WZB0 136 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 ACY3Q96HD9 319 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 GRAMD2BQ96HH9 432 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 U3KQ87 197 aa9.88□□□□□ -0.83
USB1-205ENST00000561743 CCDC160A6NGH7 325 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 TOMM40O96008 361 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 IL4P05112 153 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 HNRNPCP07910 306 aaKnown RBP eCLIP9.87□□□□□ -0.83
USB1-205ENST00000561743 ZNF688P0C7X2 276 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 AP3S2P59780 193 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 TMEM128Q5BJH2 165 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 C16orf54Q6UWD8 224 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 TRPT1Q86TN4 253 aaKnown RBP9.87□□□□□ -0.83
USB1-205ENST00000561743 STHQ8IWL8 128 aa9.87□□□□□ -0.83
USB1-205ENST00000561743 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
USB1-205ENST00000561743 C11orf68Q9H3H3 251 aaKnown RBP9.87□□□□□ -0.83
USB1-205ENST00000561743 DUXBA0A1W2PPF3 345 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 PITX3O75364 302 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 GIG44P09565 113 aaPredicted RBP9.86□□□□□ -0.83
USB1-205ENST00000561743 RD3LP0DJH9 198 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 PSG1P11464 419 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 S100A5P33763 92 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 CCDC190Q86UF4 302 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 LRTM2Q8N967 370 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 OR1S1Q8NH92 325 aa9.86□□□□□ -0.83
USB1-205ENST00000561743 BIRC6Q9NR09 4857 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 PIGBOS1A0A0B4J2F0 54 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 HELTA6NFD8 242 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 KNCNA6PVL3 124 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 IFNA4P05014 189 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 VAMP1P23763 118 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 EIF2B2P49770 351 aaKnown RBP9.85□□□□□ -0.83
USB1-205ENST00000561743 DHRS2Q13268 280 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
USB1-205ENST00000561743 DEDD2Q8WXF8 326 aa9.85□□□□□ -0.83
USB1-205ENST00000561743 SLC25A21Q9BQT8 299 aaPredicted RBP9.85□□□□□ -0.83
USB1-205ENST00000561743 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
USB1-205ENST00000561743 DEFB4AO15263 64 aa9.84□□□□□ -0.83
USB1-205ENST00000561743 BUB3O43684 328 aa9.84□□□□□ -0.83
USB1-205ENST00000561743 LY6G6CO95867 125 aa9.84□□□□□ -0.83
USB1-205ENST00000561743 SPP1P10451 314 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms