RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CECR2Q9BXF3 1484 aa-0.16□□□□□ -2.43
FOXN3-216ENST00000557496 RIMBP3CA6NJZ7 1639 aa-0.16□□□□□ -2.43
FOXN3-216ENST00000557496 RIMBP3BA6NNM3 1639 aa-0.16□□□□□ -2.43
FOXN3-216ENST00000557496 RIMBP3Q9UFD9 1639 aa-0.16□□□□□ -2.43
FOXN3-216ENST00000557496 ALMS1Q8TCU4 4167 aa-0.16□□□□□ -2.43
FOXN3-216ENST00000557496 DOCK11Q5JSL3 2073 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CTTNBP2Q8WZ74 1663 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 FAM236DA0A1B0GTK5 79 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TRBV6-4A0A1B0GX49 114 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 PQLC2LA1A4F0 135 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 NUPR2A6NF83 97 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TLCD2A6NGC4 264 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 SMIM9A6NGZ8 99 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 DISC1C4P0D8 188 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 EEF1E1-BLOC1S5C9J1V9 151 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 H0Y980 276 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 SULT1B1O43704 296 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CALUO43852 315 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 STX10O60499 249 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 ZNF682O95780 498 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 IGLV1-51P01701 117 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CD2P06729 351 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CD14P08571 375 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TPM1P09493 284 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 PET100P0DJ07 73 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 C8orf88P0DMB2 117 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 FAM236CP0DP71 79 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 KCNE1P15382 129 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 NFYAP23511 347 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 DDTP30046 118 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 RNASE4P34096 147 aaKnown RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 RPL5P46777 297 aaKnown RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 HAAOP46952 286 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 MARCKSL1P49006 195 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CDC34P49427 236 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TCL1AP56279 114 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 HBA1P69905 142 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 IFITM2Q01629 132 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 RHEBQ15382 184 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 GRK1Q15835 563 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 NDUFA5Q16718 116 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 LINC01554Q52M75 96 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 KHDC3LQ587J8 217 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 COQ5Q5HYK3 327 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CLVS2Q5SYC1 327 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 C6orf52Q5T4I8 152 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 GLT8D1Q68CQ7 371 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 C5orf46Q6UWT4 87 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 LINC00322Q6ZN03 302 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 MIR17HGQ75NE6 70 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 GKN2Q86XP6 184 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 PHF13Q86YI8 300 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 IQCF2Q8IXL9 164 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 C12orf45Q8N5I9 185 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 OR4E2Q8NGC2 313 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 OR4D11Q8NGI4 311 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 OR13D1Q8NGV5 346 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 STAG3L4Q8TBR4 150 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 PLAC4Q8WY50 150 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 SLC35B4Q969S0 331 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 ROPN1LQ96C74 230 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CMTM5Q96DZ9 223 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 ZC2HC1AQ96GY0 325 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 SCGB3A1Q96QR1 104 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 NIPSNAP1Q9BPW8 284 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 DHRS9Q9BPW9 319 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 LLPHQ9BRT6 129 aaKnown RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 NDEL1Q9GZM8 345 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 RNASE7Q9H1E1 156 aaKnown RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 OR51V1Q9H2C8 321 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 NIT2Q9NQR4 276 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TAS2R4Q9NYW5 299 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CKLFQ9UBR5 152 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CFAP45Q9UL16 551 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CYSLTR1Q9Y271 337 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 V9GYY5 206 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 KIF1BO60333 1816 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 MIA2Q96PC5 1412 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 MED1Q15648 1581 aaPredicted RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 BCORL1Q5H9F3 1711 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 TANC1Q9C0D5 1861 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 CHD6Q8TD26 2715 aa-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 MAP1BP46821 2468 aaKnown RBP-0.16□□□□□ -2.44
FOXN3-216ENST00000557496 RBBP6Q7Z6E9 1792 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 PIEZO2Q9H5I5 2752 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 MAP1AP78559 2803 aaPredicted RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 AFDNP55196 1824 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 IGHV1-58A0A0C4DH39 117 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 EXOC1LA0A1B0GW35 172 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 C1orf196B1AJZ1 125 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 HSBP1L1C9JCN9 74 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 M0QZ92 97 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 PFDN6O15212 129 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 TGOLN2O43493 480 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 NUPR1O60356 82 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 GADD45GO95257 159 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 LY6G6CO95867 125 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 HLA-DRB1P01911 266 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms