RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SS18Q15532 418 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 BCL6BQ8N143 479 aaPredicted RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 ZNF784Q8NCA9 323 aaPredicted RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 COX14Q96I36 57 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CBLN3Q6UW01 205 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 DPM3Q9P2X0 92 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 COL22A1Q8NFW1 1626 aaPredicted RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 VCYO14598 125 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 PRTN3P24158 256 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 UCP1P25874 307 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CCL13Q99616 98 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 SRP19P09132 144 aaKnown RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 SCTP09683 121 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CCL8P80075 99 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 IL17RELQ6ZVW7 336 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CCL4L1Q8NHW4 92 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 HAX1O00165 279 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 CGAP01215 116 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 TMEM196Q5HYL7 178 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 GTF3AQ92664 365 aaKnown RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 LY96Q9Y6Y9 160 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 EGR4Q05215 589 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 KLHDC9Q8NEP7 349 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 SIPA1L1O43166 1804 aa7.47□□□□□ -1.21
SYNE3-205ENST00000557275 SPANXB1Q9NS25 103 aaPredicted RBP7.47□□□□□ -1.21
SYNE3-205ENST00000557275 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.21
SYNE3-205ENST00000557275 MSRB3Q8IXL7 192 aa7.46□□□□□ -1.21
SYNE3-205ENST00000557275 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.21
SYNE3-205ENST00000557275 ATP6V0BQ99437 205 aa7.46□□□□□ -1.21
SYNE3-205ENST00000557275 HELZP42694 1942 aaKnown RBP7.46□□□□□ -1.21
SYNE3-205ENST00000557275 PGFP49763 221 aa7.46□□□□□ -1.21
SYNE3-205ENST00000557275 ATP5J2P56134 94 aa7.46□□□□□ -1.21
SYNE3-205ENST00000557275 IGHG3P01860 377 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 TIMM21Q9BVV7 248 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 A0A1B0GW64 132 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 HIST1H2BLQ99880 126 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 NCR2O95944 276 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 OR13A1Q8NGR1 328 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 MMP23AO75900 390 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
SYNE3-205ENST00000557275 LINC00312Q9Y6C7 94 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 ZIC1Q15915 447 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
SYNE3-205ENST00000557275 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 NEU4Q8WWR8 484 aaPredicted RBP7.45□□□□□ -1.22
SYNE3-205ENST00000557275 UBR3Q6ZT12 1888 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 SHISA8B8ZZ34 492 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 ZIC3O60481 467 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 FDCSPQ8NFU4 85 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 GFRA4Q9GZZ7 299 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 SNAI2O43623 268 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 LYPD1Q8N2G4 141 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 OBSL1O75147 1896 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 TCRBV4S1A1TA0A5B7 111 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 C1QAP02745 245 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 ST6GALNAC3Q8NDV1 305 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 A0A1W2PRD5 423 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 A0A1W2PRF3 423 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 A0A1W2PRM7 423 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 NPC2P61916 151 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 RNF125Q96EQ8 232 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 KIR3DS1Q14943 382 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 J3KT08 172 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 FCN3O75636 299 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 FHL5Q5TD97 284 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 SPATA31B1PQ5VZV4 182 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 TTTY12Q9BZ98 90 aa7.45□□□□□ -1.22
SYNE3-205ENST00000557275 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 TRBV5-7A0A0A0MS05 114 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 LDLRAD4O15165 306 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 PSCAO43653 123 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 IGFBP3P17936 291 aaPredicted RBP7.44□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE1Q13065 139 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 ZNF708P17019 499 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 LINC01555Q8NAE3 123 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE12JA6NER3 117 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 TIMP3P35625 211 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE4Q13068 117 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE5Q13069 117 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE6Q13070 117 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 HEPN1Q6WQI6 88 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 TRAV13-2A0A0B4J235 113 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 SPSB3Q6PJ21 355 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 TNFRSF12AQ9NP84 129 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 MGAMO43451 1857 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 SEC61GP60059 68 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 FBLIM1Q8WUP2 373 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 WDR87Q6ZQQ6 2873 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 PLXNA2O75051 1894 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 ST6GALNAC6Q969X2 333 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 TM2D1Q9BX74 207 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 CCL1P22362 96 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 GUSBP1Q15486 140 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms