RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 OR4B1Q8NGF8 309 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 DDB2Q92466 427 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 ZPBPQ9BS86 351 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 SAP30LQ9HAJ7 183 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 KBTBD11-OT1A0A1B0GTJ5 212 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 M0QZK8 103 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 CDX4O14627 284 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 C8orf88P0DMB2 117 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 LINC00322Q6ZN03 302 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 PRR7Q8TB68 274 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 CCL17Q92583 94 aa13.85□□□□□ -0.19
PPP4R3A-208ENST00000555462 PGPA6NDG6 321 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 SLC25A17O43808 307 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 TNFAIP6P98066 277 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 PAXXQ9BUH6 204 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 TMEM167BQ9NRX6 74 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 UQCR10Q9UDW1 63 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 Q0VG73 95 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 SSX8Q7RTT4 187 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 NEUROG1Q92886 237 aa13.84□□□□□ -0.19
PPP4R3A-208ENST00000555462 CA7P43166 264 aa13.83□□□□□ -0.19
PPP4R3A-208ENST00000555462 SELENOVP59797 346 aa13.83□□□□□ -0.19
PPP4R3A-208ENST00000555462 VAMP3Q15836 100 aa13.83□□□□□ -0.19
PPP4R3A-208ENST00000555462 UBALD2Q8IYN6 164 aa13.83□□□□□ -0.19
PPP4R3A-208ENST00000555462 SLC25A2Q9BXI2 301 aa13.83□□□□□ -0.19
PPP4R3A-208ENST00000555462 IGF2RP11717 2491 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 PRRX1P54821 245 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 NAA38Q9BRA0 125 aaKnown RBP13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 SPG11Q96JI7 2443 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 C9JCJ5 164 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 TSPOP30536 169 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 UBE2G1P62253 170 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 RPL19P84098 196 aaKnown RBP13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 LINC00305Q7Z4B0 112 aa13.83□□□□□ -0.2
PPP4R3A-208ENST00000555462 RNASE2P10153 161 aaKnown RBP13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 ZNF71Q9NQZ8 489 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 UPK2O00526 184 aa13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 FAM87AP0C7U9 286 aa13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 CEACAM8P31997 349 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 WT1-ASQ06250 92 aa13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 C10orf113Q5VZT2 155 aa13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 PATE2Q6UY27 113 aa13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 WASHC3Q9Y3C0 194 aa13.82□□□□□ -0.2
PPP4R3A-208ENST00000555462 PPOXP50336 477 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 TAS2R45P59539 299 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 MPV17L2Q567V2 206 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 TCTEX1D1Q8N7M0 179 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 FOXA2Q9Y261 457 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 ZFP30Q9Y2G7 519 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 ANKHD1Q8IWZ3 2542 aaKnown RBP13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 CTRLP40313 264 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 FOXE3Q13461 319 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 RTL8BQ17RB0 113 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 ZNF474Q6S9Z5 364 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 OR10X1Q8NGY0 326 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 C11orf52Q96A22 123 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 TNFRSF19Q9NS68 423 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 TMSB15BA0A087X1C1 80 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 CNTFRP26992 372 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 WDR73Q6P4I2 378 aa13.81□□□□□ -0.2
PPP4R3A-208ENST00000555462 FAM181BA6NEQ2 426 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 WFDC8Q8IUA0 241 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 FAM167A-AS1Q96KT0 104 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 DKK4Q9UBT3 224 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 ZNF292O60281 2723 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 DSCAML1Q8TD84 2053 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 KLK10O43240 276 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 HLA-DQA1P01909 254 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 PRCDQ00LT1 54 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 DEFB123Q8N688 67 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 BSNQ9UPA5 3926 aa13.8□□□□□ -0.2
PPP4R3A-208ENST00000555462 F2RL2O00254 374 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 PEX7O00628 323 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 SEM1Q6ZVN7 128 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 PRNDQ9UKY0 176 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 IZUMO1RA6ND01 250 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 CD69Q07108 199 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 TBR1Q16650 682 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 CIARTQ8N365 385 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 IGF2BP2-AS1Q96M15 143 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 SFTPCP11686 197 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 EXOC3-AS1Q8N2X6 119 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 TXNDC17Q9BRA2 123 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 RNF7Q9UBF6 113 aa13.79□□□□□ -0.2
PPP4R3A-208ENST00000555462 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 LYPD2Q6UXB3 125 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 DEFB124Q8NES8 71 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 GAFA1Q96PS6 74 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 SLC25A15Q9Y619 301 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 TRGV8A0A0C4DH27 118 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 NUDT3O95989 172 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 ERHP84090 104 aaKnown RBP13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 TMEM177Q53S58 311 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 GUCD1Q96NT3 240 aa13.78□□□□□ -0.2
PPP4R3A-208ENST00000555462 SMIM27A0A1W2PRY6 76 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 2411.6 ms