RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	DNAH7	Q8WXX0	4024 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440		A0A0G2JRQ6	117 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	TSPAN4	O14817	238 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	GNG7	O60262	68 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	MT-CO2	P00403	227 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	IFNA17	P01571	189 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	TNFSF8	P32971	234 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	SNCA	P37840	140 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	HOXA1	P49639	335 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	SUB1	P53999	127 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	DHODH	Q02127	395 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	BSX	Q3C1V8	233 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	SPINK9	Q5DT21	86 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	DEFB125	Q8N687	156 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR52E5	Q8NH55	327 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	LHFPL5	Q8TAF8	219 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	GLYATL2	Q8WU03	294 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	DEDD2	Q8WXF8	326 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	PINX1	Q96BK5	328 aa	Known RBP	5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	GALNT14	Q96FL9	552 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	ZNF414	Q96IQ9	312 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR10C1	Q96KK4	312 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	SCGB3A2	Q96PL1	93 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	FAM110A	Q9BQ89	295 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	C20orf24	Q9BUV8	137 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	HIPK2	Q9H2X6	1198 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	ENY2	Q9NPA8	101 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	CACFD1	Q9UGQ2	172 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	GPR132	Q9UNW8	380 aa		5.73	□□□□□ -1.49
SNHG1-223	ENST00000545440	AGRN	O00468	2067 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	NBEAL2	Q6ZNJ1	2754 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	RBMY1B	A6NDE4	496 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	RBMY1E	A6NEQ0	496 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	FABP12	A6NFH5	140 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	ZNF701	M0R085	212 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	RBMY1D	P0C7P1	496 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	RNASE2	P10153	161 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	BMI1	P35226	326 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	FAU	P35544	74 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	ETV6	P41212	452 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	NPBWR1	P48145	328 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	SPCS3	P61009	180 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	CASC10	Q5T4H9	136 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	TMEM268	Q5VZI3	342 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	LAMTOR1	Q6IAA8	161 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	DUSP18	Q8NEJ0	188 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	IL22RA2	Q969J5	263 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	GINS3	Q9BRX5	216 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	RBM38	Q9H0Z9	239 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	MCUB	Q9NWR8	336 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	CACNG5	Q9UF02	275 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	SELENOK	Q9Y6D0	94 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	TMEM56-RWDD3	S4R434	201 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440		V9GYH0	126 aa		5.72	□□□□□ -1.49
SNHG1-223	ENST00000545440	IGHV3OR16-8	A0A075B7F1	116 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	PIGBOS1	A0A0B4J2F0	54 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	IGHV7-4-1	A0A0J9YVY3	117 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	CCDC160	A6NGH7	325 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	OR4C46	A6NHA9	309 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	SCGB2A1	O75556	95 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	CD5	P06127	495 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	S100A5	P33763	92 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	OPRK1	P41145	380 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	HTR2B	P41595	481 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	AP3S2	P59780	193 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	SRPX	P78539	464 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	KLF9	Q13886	244 aa	Predicted RBP	5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	ZNF79	Q15937	498 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	ZNF600	Q6ZNG1	722 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	SELENOH	Q8IZQ5	122 aa	Known RBP	5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	TMEM116	Q8NCL8	245 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	SLC24A4	Q8NFF2	622 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	TMEM230	Q96A57	120 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	GGTLC1	Q9BX51	225 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	RETN	Q9HD89	108 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	SMPX	Q9UHP9	88 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	KCNIP3	Q9Y2W7	256 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	CSMD3	Q7Z407	3707 aa		5.71	□□□□□ -1.5
SNHG1-223	ENST00000545440	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	TRAV14DV4	A0A0A6YYC5	116 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440		A0A0B4J2A0	478 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	CHEK1	O14757	476 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	ZNF207	O43670	478 aa	Known RBP	5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	CLN5	O75503	358 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	YIF1A	O95070	293 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	IGHV3-48	P01763	117 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	SULT1A3	P0DMM9	295 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	SULT1A4	P0DMN0	295 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	ANXA3	P12429	323 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	LYL1	P12980	280 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	VAMP2	P63027	116 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	SUPT4H1	P63272	117 aa	Known RBP	5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	TMEM187	Q14656	261 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	ODF3L2	Q3SX64	289 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	ANXA2R	Q3ZCQ2	193 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	C2orf83	Q53S99	150 aa		5.7	□□□□□ -1.5
SNHG1-223	ENST00000545440	NMS	Q5H8A3	153 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms