RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LY96Q9Y6Y9 160 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 PPIAL4CA0A0B4J2A2 164 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 PSPNO60542 156 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 PPIAL4GP0DN37 164 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 OR5A1Q8NGJ0 315 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 TRAV5A0A0B4J249 113 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 IGHV2OR16-5A0A0B4J2B6 119 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 AREGP15514 252 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 CACNG7P62955 275 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 FBXL15Q9H469 300 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 OTORQ9NRC9 128 aa16.05■□□□□ 0.16
SUDS3-204ENST00000543473 NPIPB11E5RHQ5 1161 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 LOXL3P58215 753 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 ASCL4Q6XD76 172 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 TCRBV4S1A1TA0A5B7 111 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 FOXH1O75593 365 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 FER1L6-AS1Q8NA97 138 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 TRBV6-6A0A0A6YYG2 114 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 HBDP02042 147 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 ABHD17AQ96GS6 310 aa16.04■□□□□ 0.16
SUDS3-204ENST00000543473 FAM53AQ6NSI3 398 aaPredicted RBP16.03■□□□□ 0.16
SUDS3-204ENST00000543473 RAXQ9Y2V3 346 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 WNK2Q9Y3S1 2297 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 INTS1Q8N201 2190 aaKnown RBP16.03■□□□□ 0.16
SUDS3-204ENST00000543473 RAB9AP51151 201 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 FOXA2Q9Y261 457 aaPredicted RBP16.03■□□□□ 0.16
SUDS3-204ENST00000543473 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 IGHV1-69-2A0A0G2JMI3 117 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 LIME1Q9H400 295 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 S4R3C0 116 aa16.03■□□□□ 0.16
SUDS3-204ENST00000543473 IL15RAQ13261 267 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 RASL11AQ6T310 242 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 NTF4P34130 210 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 ID1P41134 155 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 TIMM23BQ5SRD1 257 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 GGNQ86UU5 652 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 SELENOKQ9Y6D0 94 aa16.02■□□□□ 0.16
SUDS3-204ENST00000543473 hDV102S1A0JD36 115 aa16.02■□□□□ 0.15
SUDS3-204ENST00000543473 C1orf162Q8NEQ5 155 aaPredicted RBP16.02■□□□□ 0.15
SUDS3-204ENST00000543473 MRPL27Q9P0M9 148 aaKnown RBP16.02■□□□□ 0.15
SUDS3-204ENST00000543473 FAM106CPP0CH98 169 aa16.02■□□□□ 0.15
SUDS3-204ENST00000543473 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 NPSP0C0P6 89 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 CDKN1AP38936 164 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 HSD52Q0P140 79 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 C15orf62A8K5M9 175 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 PAX9P55771 341 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 PRR31Q5SQ13 230 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 NAA38Q9BRA0 125 aaKnown RBP16.01■□□□□ 0.15
SUDS3-204ENST00000543473 SIGMAR1Q99720 223 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 BEX4Q9NWD9 120 aaPredicted RBP16.01■□□□□ 0.15
SUDS3-204ENST00000543473 LINC00312Q9Y6C7 94 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 IGKV3D-15A0A087WSY6 115 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 C20orf204Q6ZNR8 217 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 KIR2DL4Q99706 377 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 TANC1Q9C0D5 1861 aa16.01■□□□□ 0.15
SUDS3-204ENST00000543473 IGHV3OR16-13A0A075B7E8 117 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 IGHV3-74A0A0B4J1X5 117 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 LILRA1O75019 489 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 Q0VG73 95 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 APOMO95445 188 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 LEPP41159 167 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 ZNF585BQ52M93 769 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 CDPF1Q6NVV7 123 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 SCGB3A1Q96QR1 104 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 DIDO1Q9BTC0 2240 aaKnown RBP16■□□□□ 0.15
SUDS3-204ENST00000543473 TMEM170BQ5T4T1 132 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 COX11Q9Y6N1 276 aa16■□□□□ 0.15
SUDS3-204ENST00000543473 IGKV1-6A0A0C4DH72 117 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 CCL3L1P16619 93 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 MEF2CQ06413 473 aaPredicted RBP15.99■□□□□ 0.15
SUDS3-204ENST00000543473 OR10W1Q8NGF6 305 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 LYPD6BQ8NI32 183 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 IFI27L1Q96BM0 104 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 RNF115Q9Y4L5 304 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 A0A087X0K7 114 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 OR5AN1Q8NGI8 311 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 ANAPC1Q9H1A4 1944 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 NUP35Q8NFH5 326 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 ZNF524Q96C55 264 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 COQ2Q96H96 371 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 TRAV3A0A0B4J244 114 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 LINC00473A8K010 186 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 TPTE2P1Q5T6R2 138 aa15.99■□□□□ 0.15
SUDS3-204ENST00000543473 MRPS16Q9Y3D3 137 aaKnown RBP15.99■□□□□ 0.15
SUDS3-204ENST00000543473 A0A1W2PS18 150 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 WISP1O95388 367 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 ZNF726P1Q15940 193 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 PSG8Q9UQ74 426 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 M0R381 172 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 SMAGPQ0VAQ4 97 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 FBXL7Q9UJT9 491 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 PINLYPA6NC86 204 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.98■□□□□ 0.15
SUDS3-204ENST00000543473 NDUFA3O95167 84 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 NPPCP23582 126 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 EMP1P54849 157 aa15.98■□□□□ 0.15
SUDS3-204ENST00000543473 ADIPOQQ15848 244 aa15.97■□□□□ 0.15
SUDS3-204ENST00000543473 FOXL2NBQ6ZUU3 175 aa15.97■□□□□ 0.15
SUDS3-204ENST00000543473 DOCK9Q9BZ29 2069 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms