RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 E7EUB6 86 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 F2Z2F3 143 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 OR7C2O60412 319 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 IGLV2-23P01705 113 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 TNFRSF1AP19438 455 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 MYCNOSP40205 109 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 DLX6P56179 175 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 NUTF2P61970 127 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 ERHP84090 104 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 RPL19P84098 196 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 WT1-ASQ06250 92 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 KIR3DS1Q14943 382 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 MRGPRG-AS1Q2M3A8 158 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 MORN5Q5VZ52 161 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM200BQ69YZ2 307 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 PATE2Q6UY27 113 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 PDPNQ86YL7 162 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 DOLPP1Q86YN1 238 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 Q8N976 141 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 OR2T6Q8NHC8 308 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 WIPF2Q8TF74 440 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 RND1Q92730 232 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 MBD6Q96DN6 1003 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 HARBI1Q96MB7 349 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 BBC3Q96PG8 261 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 TBX15Q96SF7 602 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 NEU1Q99519 415 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 HSPB9Q9BQS6 159 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 COMMD5Q9GZQ3 224 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 RNASE7Q9H1E1 156 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 FNDC4Q9H6D8 234 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 GNB4Q9HAV0 340 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 APC2O95996 2303 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 LOC400499M0QZD8 3231 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 CADP27708 2225 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 SMG1Q96Q15 3661 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 SPENQ96T58 3664 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 ITPR1Q14643 2758 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TRAV5A0A0B4J249 113 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TCRBV4S1A1TA0A5B7 111 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 IZUMO1RA6ND01 250 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 DPRXA6NFQ7 191 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM178BH3BS89 294 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 K7EM74 188 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 M0R143 59 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 AMY1AP04745 511 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 REG1AP05451 166 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 GPX1P07203 203 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 CRYGCP07315 174 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 CCL3L1P16619 93 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 CHRNB4P30926 498 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 SSBP2P81877 361 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 IBA57Q5T440 356 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 RASL11AQ6T310 242 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM108Q6UXF1 575 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF329Q86UD4 541 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 BAGE3Q86Y29 109 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 BAGE2Q86Y30 109 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TGIF2LXQ8IUE1 241 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 OR5AU1Q8NGC0 362 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 OR4C13Q8NGP0 309 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 OR1L4Q8NGR5 311 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 VSTM2AQ8TAG5 236 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM186Q96B77 213 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 FLYWCH2Q96CP2 140 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF430Q9H8G1 570 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
ATPAF1-212ENST00000542495 TNCP24821 2201 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PPIAL4EA0A075B759 164 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 A0A0G2JNJ9 132 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 A0A1W2PS18 150 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF705FA8MVS1 300 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PPIAL4DF5H284 164 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 C16orf97H3BN30 126 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 BMPR1BO00238 502 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 HLA-DQA1P01909 254 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF705DP0CH99 300 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF705BP0CI00 300 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PPIAL4FP0DN26 164 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 BRS3P32247 399 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CDKN1AP38936 164 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 TDGF1P3P51864 188 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 UBE2L3P68036 154 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CCL8P80075 99 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PAX2Q02962 417 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 DIAPH2-AS1Q14236 149 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 FXYD3Q14802 87 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 USF2Q15853 346 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 TDRG1Q3Y452 100 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 C10orf113Q5VZT2 155 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 SSX8Q7RTT4 187 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 ZCCHC24Q8N2G6 241 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 NPIPB3Q92617 1050 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 FXYD5Q96DB9 178 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 MIEN1Q9BRT3 115 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PAXXQ9BUH6 204 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PRORYQ9H606 182 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF355PQ9NSJ1 428 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CBLN4Q9NTU7 201 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms