RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 IGLC1P0CG04 106 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 NPPCP23582 126 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 CRYBB3P26998 211 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 RND2P52198 227 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 CMC4P56277 68 aaPredicted RBP14.32□□□□□ -0.12
RAP1B-221ENST00000540209 ZNF124Q15973 351 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 TIGITQ495A1 244 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 TMED4Q7Z7H5 227 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 MS4A6AQ9H2W1 248 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 MAP6D1Q9H9H5 199 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 BIRC6Q9NR09 4857 aa14.32□□□□□ -0.12
RAP1B-221ENST00000540209 PIGBOS1A0A0B4J2F0 54 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 LCE6AA0A183 80 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 DUXBA0A1W2PPF3 345 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 PAFAH1B2P68402 229 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 PLECQ15149 4684 aaKnown RBP14.31□□□□□ -0.12
RAP1B-221ENST00000540209 DEFB135Q30KP9 77 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 OR1S2Q8NGQ3 325 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 DTD1Q8TEA8 209 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 METTL26Q96S19 204 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 SLC25A21Q9BQT8 299 aaPredicted RBP14.31□□□□□ -0.12
RAP1B-221ENST00000540209 SRRQ9GZT4 340 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 RBKSQ9H477 322 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 TMEM231Q9H6L2 316 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 U3KQ87 197 aa14.31□□□□□ -0.12
RAP1B-221ENST00000540209 TRAV2A0A0B4J234 112 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 A0A1W2PS18 150 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 SPRY2O43597 315 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 RPL35AP18077 110 aaKnown RBP14.3□□□□□ -0.12
RAP1B-221ENST00000540209 OR10J1P30954 320 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 YPEL3P61236 119 aaPredicted RBP14.3□□□□□ -0.12
RAP1B-221ENST00000540209 SPANXN2Q5MJ10 180 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 ETFRF1Q6IPR1 90 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 NOXA1Q86UR1 476 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 STPG3Q8N7X2 389 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 LRTM2Q8N967 370 aa14.3□□□□□ -0.12
RAP1B-221ENST00000540209 DNAH1Q9P2D7 4330 aa14.29□□□□□ -0.12
RAP1B-221ENST00000540209 IFNA10P01566 189 aa14.29□□□□□ -0.12
RAP1B-221ENST00000540209 RNF183Q96D59 192 aa14.29□□□□□ -0.12
RAP1B-221ENST00000540209 PITX3O75364 302 aa14.28□□□□□ -0.12
RAP1B-221ENST00000540209 VAMP1P23763 118 aa14.28□□□□□ -0.12
RAP1B-221ENST00000540209 OR1S1Q8NH92 325 aa14.28□□□□□ -0.12
RAP1B-221ENST00000540209 NPIPB3Q92617 1050 aa14.28□□□□□ -0.12
RAP1B-221ENST00000540209 U3KQE9 123 aa14.28□□□□□ -0.12
RAP1B-221ENST00000540209 HYDINQ4G0P3 5121 aa14.28□□□□□ -0.12
RAP1B-221ENST00000540209 DNASE2O00115 360 aaPredicted RBP14.27□□□□□ -0.13
RAP1B-221ENST00000540209 P2RY1P47900 373 aa14.27□□□□□ -0.13
RAP1B-221ENST00000540209 RPL11P62913 178 aaKnown RBP14.27□□□□□ -0.13
RAP1B-221ENST00000540209 PPP1R1AQ13522 171 aa14.27□□□□□ -0.13
RAP1B-221ENST00000540209 RBMS2Q15434 407 aaKnown RBP14.27□□□□□ -0.13
RAP1B-221ENST00000540209 FAM24BQ8N5W8 94 aa14.27□□□□□ -0.13
RAP1B-221ENST00000540209 Q8WTZ3 238 aa14.27□□□□□ -0.13
RAP1B-221ENST00000540209 SFT2D2O95562 160 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 SLC25A6P12236 298 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 ATP5IP56385 69 aaPredicted RBP14.26□□□□□ -0.13
RAP1B-221ENST00000540209 BAK1Q16611 211 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 LYG2Q86SG7 212 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 CENPSQ8N2Z9 138 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 ACY3Q96HD9 319 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 NARS2Q96I59 477 aaKnown RBP14.26□□□□□ -0.13
RAP1B-221ENST00000540209 CSTL1Q9H114 145 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 RABAC1Q9UI14 185 aa14.26□□□□□ -0.13
RAP1B-221ENST00000540209 A0A0J9YWU9 116 aa14.25□□□□□ -0.13
RAP1B-221ENST00000540209 K7EQG2 157 aa14.25□□□□□ -0.13
RAP1B-221ENST00000540209 TOMM40O96008 361 aa14.25□□□□□ -0.13
RAP1B-221ENST00000540209 DEFB131AP59861 70 aa14.25□□□□□ -0.13
RAP1B-221ENST00000540209 USF2Q15853 346 aaPredicted RBP14.25□□□□□ -0.13
RAP1B-221ENST00000540209 GRAMD2BQ96HH9 432 aa14.25□□□□□ -0.13
RAP1B-221ENST00000540209 TMED3Q9Y3Q3 217 aa14.25□□□□□ -0.13
RAP1B-221ENST00000540209 FAM90A26D6RGX4 464 aa14.24□□□□□ -0.13
RAP1B-221ENST00000540209 IL4P05112 153 aa14.24□□□□□ -0.13
RAP1B-221ENST00000540209 HNRNPCP07910 306 aaKnown RBP eCLIP14.24□□□□□ -0.134e-7■■■□□ 17
RAP1B-221ENST00000540209 EWSR1Q01844 656 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAP1B-221ENST00000540209 LEMD1Q68G75 181 aa14.24□□□□□ -0.13
RAP1B-221ENST00000540209 STXBP6Q8NFX7 210 aa14.24□□□□□ -0.13
RAP1B-221ENST00000540209 DCANP1Q8TF63 244 aa14.24□□□□□ -0.13
RAP1B-221ENST00000540209 GLMPQ8WWB7 406 aa14.24□□□□□ -0.13
RAP1B-221ENST00000540209 SDHCQ99643 169 aaPredicted RBP14.24□□□□□ -0.13
RAP1B-221ENST00000540209 NAP1L6A6NFF2 107 aa14.23□□□□□ -0.13
RAP1B-221ENST00000540209 MPTX1A8MV57 137 aa14.23□□□□□ -0.13
RAP1B-221ENST00000540209 IFNA4P05014 189 aa14.23□□□□□ -0.13
RAP1B-221ENST00000540209 RD3LP0DJH9 198 aa14.23□□□□□ -0.13
RAP1B-221ENST00000540209 UBE2MP61081 183 aaKnown RBP14.23□□□□□ -0.13
RAP1B-221ENST00000540209 TRIQKQ629K1 86 aa14.23□□□□□ -0.13
RAP1B-221ENST00000540209 C16orf54Q6UWD8 224 aa14.23□□□□□ -0.13
RAP1B-221ENST00000540209 NDUFB6O95139 128 aa14.22□□□□□ -0.13
RAP1B-221ENST00000540209 PSG1P11464 419 aa14.22□□□□□ -0.13
RAP1B-221ENST00000540209 GPX4P36969 197 aaPredicted RBP14.22□□□□□ -0.13
RAP1B-221ENST00000540209 GAMTQ14353 236 aa14.22□□□□□ -0.13
RAP1B-221ENST00000540209 GATAD1Q8WUU5 269 aa14.22□□□□□ -0.13
RAP1B-221ENST00000540209 AGRNO00468 2067 aa14.22□□□□□ -0.13
RAP1B-221ENST00000540209 ALMS1Q8TCU4 4167 aa14.21□□□□□ -0.13
RAP1B-221ENST00000540209 IGKV1D-37A0A075B6S9 117 aa14.21□□□□□ -0.13
RAP1B-221ENST00000540209 HELTA6NFD8 242 aa14.21□□□□□ -0.13
RAP1B-221ENST00000540209 IAPPP10997 89 aa14.21□□□□□ -0.13
RAP1B-221ENST00000540209 ATF4P18848 351 aaPredicted RBP14.21□□□□□ -0.13
RAP1B-221ENST00000540209 INPP1P49441 399 aa14.21□□□□□ -0.13
RAP1B-221ENST00000540209 EIF2B2P49770 351 aaKnown RBP14.21□□□□□ -0.13
RAP1B-221ENST00000540209 C9orf170A2RU37 121 aa14.2□□□□□ -0.14
RAP1B-221ENST00000540209 BUB3O43684 328 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms