RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FNDC10F2Z333 226 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 COX7A2P2O60397 106 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 TNFSF4P23510 183 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 VAMP3Q15836 100 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 DHRS13Q6UX07 377 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 SSX8Q7RTT4 187 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 PMCHL2Q9BQD1 86 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 ARRDC1-AS1Q9H2J1 176 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 C7orf69Q9H7B7 122 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 ZZEF1O43149 2961 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 FOXE3Q13461 319 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 ZNF596Q8TC21 504 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 MGAQ8IWI9 3026 aa11.26□□□□□ -0.61
SCNN1A-215ENST00000540037 IGHV2-70DA0A0C4DH43 119 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 WT1P19544 449 aaPredicted RBP11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 C10orf113Q5VZT2 155 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 ETFRF1Q6IPR1 90 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 OR5B3Q8NH48 314 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 FER1L6-AS2Q96M78 137 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 WASHC3Q9Y3C0 194 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 CACNA1GO43497 2377 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 LHBP01229 141 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 PGLYRP4Q96LB8 373 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 M0R1B8 84 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 NUDT3O95989 172 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 MOSP00540 346 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 APELAP0DMC3 54 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 WT1-ASQ06250 92 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
SCNN1A-215ENST00000540037 IGKV1D-37A0A075B6S9 117 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 FSTL3O95633 263 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 ORM2P19652 201 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 LINC00305Q7Z4B0 112 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 TMEM178AQ8NBL3 297 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 HARBI1Q96MB7 349 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 GAL3ST2Q9H3Q3 398 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 SELENOKQ9Y6D0 94 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 A0A1B0GXF2 115 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 K7EP13 123 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 OR2J3O76001 311 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 RTL8BQ17RB0 113 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 C19orf24Q9BVV8 132 aa11.24□□□□□ -0.61
SCNN1A-215ENST00000540037 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 CBY3A6NI87 242 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 CGB1A6NKQ9 187 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 CCL11P51671 97 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 C1orf210Q8IVY1 113 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 ASCL2Q99929 193 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 ZNF71Q9NQZ8 489 aaPredicted RBP11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 NDUFA4L2Q9NRX3 87 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 CEP250Q9BV73 2442 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 PGPA6NDG6 321 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 TOX4O94842 621 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 RASL11AQ6T310 242 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 ADTRPQ96IZ2 230 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 GAFA1Q96PS6 74 aa11.23□□□□□ -0.61
SCNN1A-215ENST00000540037 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 DLL1O00548 723 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 TAX1BP3O14907 124 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 ITGB1BP1O14713 200 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 SNAI2O43623 268 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 PSG1P11464 419 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 CFHR2P36980 270 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 CDKN1BP46527 198 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 BHLHA15Q7RTS1 189 aaPredicted RBP11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 ZNF714Q96N38 554 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 CCL3L1P16619 93 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 TPSG1Q9NRR2 321 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 SLC25A15Q9Y619 301 aa11.22□□□□□ -0.61
SCNN1A-215ENST00000540037 LOC102724200A0A096LPH7 203 aaPredicted RBP11.21□□□□□ -0.61
SCNN1A-215ENST00000540037 NKX2-8O15522 239 aa11.21□□□□□ -0.61
SCNN1A-215ENST00000540037 CSN3P07498 182 aa11.21□□□□□ -0.61
SCNN1A-215ENST00000540037 HBBP68871 147 aa11.21□□□□□ -0.61
SCNN1A-215ENST00000540037 FDCSPQ8NFU4 85 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms