RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 A4D1N5 150 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 SCGB2A1O75556 95 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 LTAP01374 205 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 CSN3P07498 182 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 CRYGSP22914 178 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 CD27P26842 260 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 ERVK11-1P61568 191 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF816Q0VGE8 651 aaPredicted RBP6.33□□□□□ -1.4
PTPRK-219ENST00000531050 KIR2DS5Q14953 304 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 CFAP126Q5VTH2 177 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 NRGNQ92686 78 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 TSACCQ96A04 125 aaPredicted RBP6.33□□□□□ -1.4
PTPRK-219ENST00000531050 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 C7orf69Q9H7B7 122 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 TMEM167BQ9NRX6 74 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 A0A096LNJ9 63 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 TRAV25A0A0B4J276 109 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 LINC01565O15544 149 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 BRWD1-AS2P59051 145 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 FGF12P61328 243 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 RPL30P62888 115 aaKnown RBP6.33□□□□□ -1.4
PTPRK-219ENST00000531050 RRN3P1Q2M238 152 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 OR8A1Q8NGG7 326 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 C8orf46Q8TAG6 207 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 AJUBAQ96IF1 538 aa6.33□□□□□ -1.4
PTPRK-219ENST00000531050 SZT2Q5T011 3432 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 KIR2DS3K7RE56 304 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 WIPF1O43516 503 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 APOHP02749 345 aaPredicted RBP6.32□□□□□ -1.4
PTPRK-219ENST00000531050 MEOX1P50221 254 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF137PP52743 207 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 CACNG7P62955 275 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 CEND1Q8N111 149 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 PIGCQ92535 297 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 CDX2Q99626 313 aaPredicted RBP6.32□□□□□ -1.4
PTPRK-219ENST00000531050 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 TCF19Q9Y242 345 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 TRANK1O15050 2925 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 NCKAP5O14513 1909 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 ACTL6BO94805 426 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 C12orf74Q32Q52 190 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 FAM159AQ6UWV7 190 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 UBALD1Q8TB05 177 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 TTTY13Q9BZ97 58 aa6.32□□□□□ -1.4
PTPRK-219ENST00000531050 FGF23Q9GZV9 251 aaPredicted RBP6.32□□□□□ -1.4
PTPRK-219ENST00000531050 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 EPOPA6NHQ4 379 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 CSN1S1P47710 185 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 SMRP1Q8NCR6 262 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PPP1R35Q8TAP8 253 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 FGFBP3Q8TAT2 258 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 MRPS17Q9Y2R5 130 aaKnown RBP6.31□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF407Q9C0G0 2248 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 C17orf98A8MV24 154 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 FAM106CPP0CH98 169 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PRR20EP86478 221 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PRR20CP86479 221 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PRR20DP86480 221 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PRR20BP86481 221 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PRR20AP86496 221 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 LOXL1Q08397 574 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-219ENST00000531050 EIF4EBP1Q13541 118 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-219ENST00000531050 FAM106AQ4KMX7 169 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 C10orf128Q5T292 105 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 ZBTB34Q8NCN2 500 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 OR5AN1Q8NGI8 311 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PPDPFLQ8WWR9 84 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 PATE1Q8WXA2 126 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 MMABQ96EY8 250 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-219ENST00000531050 VCX2Q9H322 139 aa6.31□□□□□ -1.4
PTPRK-219ENST00000531050 AKIRIN1Q9H9L7 192 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-219ENST00000531050 TRAV24A0A0B4J272 114 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 TMEM8BA6NDV4 472 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 CA6P23280 308 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 ACP1P24666 158 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 MPV17P39210 176 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 TFF2Q03403 129 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF766Q5HY98 468 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 FAM169BQ8N8A8 192 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 PGLYRP4Q96LB8 373 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 RAB9BQ9NP90 201 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
PTPRK-219ENST00000531050 CDH23Q9H251 3354 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 SYNGR3O43761 229 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 FCN3O75636 299 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 IFITM1P13164 125 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 RPRMLQ8N4K4 120 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 HSD17B10Q99714 261 aaKnown RBP6.3□□□□□ -1.4
PTPRK-219ENST00000531050 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 PLEKHA3Q9HB20 300 aa6.3□□□□□ -1.4
PTPRK-219ENST00000531050 KLF13Q9Y2Y9 288 aaPredicted RBP6.3□□□□□ -1.4
PTPRK-219ENST00000531050 ARHGEF17Q96PE2 2063 aaPredicted RBP6.3□□□□□ -1.4
PTPRK-219ENST00000531050 TRBV25-1A0A075B6N4 114 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 LTBRP36941 435 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 GAGE2BQ13066 116 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 255.1 ms