RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CCL21O00585 134 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 COX7A1P24310 79 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 BPIFB3P59826 476 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 FXYD3Q14802 87 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 OR1L6Q8NGR2 347 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 MRPL18Q9H0U6 180 aaKnown RBP14.06□□□□□ -0.16
USH1C-205ENST00000527020 TNFRSF19Q9NS68 423 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 ARHGAP32A7KAX9 2087 aa14.06□□□□□ -0.16
USH1C-205ENST00000527020 SPTA1P02549 2419 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 GRIFINA4D1Z8 144 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 TEX22C9J3V5 150 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 ISLRO14498 428 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 RBP4P02753 201 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 LDLRAD2Q5SZI1 272 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 LINC00305Q7Z4B0 112 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 ZNF329Q86UD4 541 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 PRO1933Q9H354 126 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 LY6LH3BQJ8 138 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 IER3P46695 156 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 LINC00310P59036 64 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 PKIAP61925 76 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 ADORA2A-AS1P86434 159 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 ETFRF1Q6IPR1 90 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 TRGV9Q99603 122 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 CDC42EP3Q9UKI2 254 aa14.05□□□□□ -0.16
USH1C-205ENST00000527020 LY6HO94772 140 aa14.04□□□□□ -0.16
USH1C-205ENST00000527020 PPP1R27Q86WC6 154 aa14.04□□□□□ -0.16
USH1C-205ENST00000527020 TMEM116Q8NCL8 245 aa14.04□□□□□ -0.16
USH1C-205ENST00000527020 ST6GALNAC3Q8NDV1 305 aa14.04□□□□□ -0.16
USH1C-205ENST00000527020 RAXQ9Y2V3 346 aa14.04□□□□□ -0.16
USH1C-205ENST00000527020 AMMECR1Q9Y4X0 333 aaPredicted RBP14.04□□□□□ -0.16
USH1C-205ENST00000527020 IGHV3-21A0A0B4J1V1 117 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 PAX1P15863 534 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 MYCNOSP40205 109 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 TAS2R60P59551 318 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 PAX2Q02962 417 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 NHLRC2Q8NBF2 726 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 LY6G5BQ8NDX9 201 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 FBXL15Q9H469 300 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 SNRPCP09234 159 aaKnown RBP14.03□□□□□ -0.16
USH1C-205ENST00000527020 MGST1P10620 155 aaKnown RBP14.03□□□□□ -0.16
USH1C-205ENST00000527020 CX3CL1P78423 397 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 SSX2Q16385 188 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 LHFPL4Q7Z7J7 247 aa14.03□□□□□ -0.16
USH1C-205ENST00000527020 MRPL41Q8IXM3 137 aaKnown RBP14.03□□□□□ -0.16
USH1C-205ENST00000527020 FCN1O00602 326 aa14.02□□□□□ -0.16
USH1C-205ENST00000527020 ORM2P19652 201 aa14.02□□□□□ -0.16
USH1C-205ENST00000527020 IBA57Q5T440 356 aaKnown RBP14.02□□□□□ -0.16
USH1C-205ENST00000527020 ASPHD1Q5U4P2 390 aa14.02□□□□□ -0.16
USH1C-205ENST00000527020 UNQ6494/PRO21346Q6UXR6 183 aa14.02□□□□□ -0.16
USH1C-205ENST00000527020 RPEQ96AT9 228 aa14.02□□□□□ -0.16
USH1C-205ENST00000527020 F11RQ9Y624 299 aaKnown RBP14.02□□□□□ -0.16
USH1C-205ENST00000527020 SNURFLB1AK76 121 aa14.02□□□□□ -0.17
USH1C-205ENST00000527020 PEX7O00628 323 aa14.02□□□□□ -0.17
USH1C-205ENST00000527020 OR8B3Q8NGG8 313 aa14.02□□□□□ -0.17
USH1C-205ENST00000527020 OR1B1Q8NGR6 318 aa14.02□□□□□ -0.17
USH1C-205ENST00000527020 OR8B2Q96RD0 313 aa14.02□□□□□ -0.17
USH1C-205ENST00000527020 ABCA1O95477 2261 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 SMIM27A0A1W2PRY6 76 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 SPINK4O60575 86 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 TCL1AP56279 114 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 ZNF664Q8N3J9 261 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 PERPQ96FX8 193 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 GNB1LQ9BYB4 327 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 GSX1Q9H4S2 264 aaPredicted RBP14.01□□□□□ -0.17
USH1C-205ENST00000527020 ATRXP46100 2492 aa14.01□□□□□ -0.17
USH1C-205ENST00000527020 TRBV9A0A0B4J1U6 114 aa14□□□□□ -0.17
USH1C-205ENST00000527020 TRAV34A0A0B4J273 112 aa14□□□□□ -0.17
USH1C-205ENST00000527020 DDTP30046 118 aa14□□□□□ -0.17
USH1C-205ENST00000527020 KLRB1Q12918 225 aa14□□□□□ -0.17
USH1C-205ENST00000527020 FAM168AQ92567 244 aa14□□□□□ -0.17
USH1C-205ENST00000527020 ONECUT1Q9UBC0 465 aa14□□□□□ -0.17
USH1C-205ENST00000527020 NBASA2RRP1 2371 aa14□□□□□ -0.17
USH1C-205ENST00000527020 TSTD3H0UI37 97 aa14□□□□□ -0.17
USH1C-205ENST00000527020 GNG5P63218 68 aa14□□□□□ -0.17
USH1C-205ENST00000527020 SLC35B1P78383 322 aa14□□□□□ -0.17
USH1C-205ENST00000527020 SRSF12Q8WXF0 261 aaKnown RBP14□□□□□ -0.17
USH1C-205ENST00000527020 C14orf144Q96I85 54 aa14□□□□□ -0.17
USH1C-205ENST00000527020 ZNF705GA8MUZ8 300 aaPredicted RBP13.99□□□□□ -0.17
USH1C-205ENST00000527020 F2Z2F3 143 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 CA1P00915 261 aaPredicted RBP13.99□□□□□ -0.17
USH1C-205ENST00000527020 LIPFP07098 398 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 ESDP10768 282 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 CRISP2P16562 243 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 UCNP55089 124 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 RANP62826 216 aaKnown RBP13.99□□□□□ -0.17
USH1C-205ENST00000527020 DEFA6Q01524 100 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 TMEM136Q6ZRR5 245 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 MBD6Q96DN6 1003 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 CORTO00230 105 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 GATCO43716 136 aaKnown RBP13.99□□□□□ -0.17
USH1C-205ENST00000527020 PLP1P60201 277 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 RAB4BP61018 213 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 CMTM2Q8TAZ6 248 aa13.99□□□□□ -0.17
USH1C-205ENST00000527020 TIMM23O14925 209 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 HYPMO75409 117 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 GP9P14770 177 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 TPTE2P1Q5T6R2 138 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 C11orf71Q6IPW1 123 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms