RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 AKAP6Q13023 2319 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 ARHGEF11O15085 1522 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 NBEAL1Q6ZS30 2694 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 RIMBP3CA6NJZ7 1639 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 RIMBP3BA6NNM3 1639 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 RIMBP3Q9UFD9 1639 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 LRP1BQ9NZR2 4599 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 NRXN2Q9P2S2 1712 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 TTC41PQ6P2S7 1318 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 MAP1AP78559 2803 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SETXQ7Z333 2677 aaKnown RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 ZNF142P52746 1687 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 TGP01266 2768 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 TRAV10A0A0B4J240 114 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 GSTTP1A0A1W2PQM5 241 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 C5orf49A4QMS7 147 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 F5H768 121 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 COX7A2LO14548 114 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 AZIN1O14977 448 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SULT1C4O75897 302 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HAND1O96004 215 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 ASS1P00966 412 aaKnown RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 CLPSP04118 112 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 PRM2P04554 102 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SRP19P09132 144 aaKnown RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 LINC00614P0C842 121 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 FGF6P10767 208 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 KCNE1P15382 129 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 PVALBP20472 110 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 RPS3P23396 243 aaKnown RBP eCLIP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BOP23527 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 S100A4P26447 101 aaKnown RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BBP33778 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 H2BFSP57053 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BDP58876 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 UBE2KP61086 200 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 VBP1P61758 197 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 POLR2GP62487 172 aaKnown RBP eCLIP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BCP62807 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HPCAP84074 193 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 IFITM2Q01629 132 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 FABP9Q0Z7S8 132 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SYCP1Q15431 976 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST2H2BEQ16778 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 EXOC3L4Q17RC7 722 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 C4orf26Q17RF5 130 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 MESTQ5EB52 335 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SPANXN3Q5MJ09 141 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 BRMS1LQ5PSV4 323 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SAPCD1Q5SSQ6 148 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST2H3AQ71DI3 136 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SLC51BQ86UW2 128 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 GPHB5Q86YW7 130 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 Q8IZM0 81 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST3H2BBQ8N257 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 UBL4BQ8N7F7 174 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 SIGLECL1Q8N7X8 197 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 GDPD1Q8N9F7 314 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 OR5L1Q8NGL2 311 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 OR5D14Q8NGL3 314 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 OR2T10Q8NGZ9 312 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 WFDC5Q8TCV5 224 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BHQ93079 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 ROPN1LQ96C74 230 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 GNPNAT1Q96EK6 184 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 RMND5BQ96G75 393 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 DSCR8Q96T75 97 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 GPER1Q99527 375 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 CCL13Q99616 98 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BNQ99877 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIST1H2BMQ99879 126 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 TIPINQ9BVW5 301 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 BBS2Q9BXC9 721 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 PBOV1Q9GZY1 135 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 HDHD2Q9H0R4 259 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 IFT46Q9NQC8 304 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 GPR84Q9NQS5 396 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 RSL24D1Q9UHA3 163 aaKnown RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 PRO0255Q9UI72 69 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 DKKL1Q9UK85 242 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 ERGIC3Q9Y282 383 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 ZNF292O60281 2723 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 ALMS1Q8TCU4 4167 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 PCLOQ9Y6V0 5065 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 KMT2AQ03164 3969 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 MYH6P13533 1939 aa-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 MED1Q15648 1581 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-49P-201ENST00000516080 FLGP20930 4061 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 KMT2CQ8NEZ4 4911 aaKnown RBP-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 ANK2Q01484 3957 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 IFT172Q9UG01 1749 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 HIVEP1P15822 2718 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 TMED7-TICAM2A0A0A6YYA0 188 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 C1orf232A0A0U1RR37 186 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 A0A1W2PRS3 328 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 DAPL1A0PJW8 107 aa-0.37□□□□□ -2.47
RNU4-49P-201ENST00000516080 METTL15A6NJ78 407 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms